@inproceedings{bb228900, AUTHOR = "El Kaissi, M. and Jia, M. and Reiners, D. and Dickerson, J. and Wuertele, E.", TITLE = "Visualization of Gene Regulatory Networks", BOOKTITLE = ISVC09, YEAR = "2009", PAGES = "II: 909-918", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223897"} @inproceedings{bb228901, AUTHOR = "Fuentes, A.R. and Ginori, J.V.L. and Abalo, R.G.", TITLE = "Coding Region Prediction in Genomic Sequences Using a Combination of Digital Signal Processing Approaches", BOOKTITLE = CIARP07, YEAR = "2007", PAGES = "635-642", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223898"} @inproceedings{bb228902, AUTHOR = "Ben, N. and Yang, Q.A. and Li, J.Y. and Chi keung, S. and Pal, S.K.", TITLE = "Discovering Patterns of DNA Methylation: Rule Mining with Rough Sets and Decision Trees, and Comethylation Analysis", BOOKTITLE = PReMI07, YEAR = "2007", PAGES = "389-397", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223899"} @inproceedings{bb228903, AUTHOR = "Sousa, A.V. and Mendonca, A.M. and Sa Miranda, M.C. and Campilho, A.", TITLE = "Classification-Based Segmentation of the Region of Interest in Chromatographic Images", BOOKTITLE = ICIAR11, YEAR = "2011", PAGES = "II: 68-78", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223900"} @inproceedings{bb228904, AUTHOR = "Sousa, A.V. and Mendonca, A.M. and Campilho, A. and Aguiar, R. and Sa Miranda, M.C.", TITLE = "Feature Extraction for Classification of Thin-Layer Chromatography Images", BOOKTITLE = ICIAR05, YEAR = "2005", PAGES = "974-981", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223901"} @inproceedings{bb228905, AUTHOR = "Moreira, B.M. and Sousa, A.V. and Mendonca, A.M. and Campilho, A.", TITLE = "Correction of Geometrical Distortions in Bands of Chromatography Images", BOOKTITLE = ICIAR13, YEAR = "2013", PAGES = "274-281", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223902"} @inproceedings{bb228906, AUTHOR = "Moreira, B.M. and Sousa, A.V. and Mendonca, A.M. and Campilho, A.", TITLE = "Automatic Lane Detection in Chromatography Images", BOOKTITLE = ICIAR12, YEAR = "2012", PAGES = "II: 180-187", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223903"} @inproceedings{bb228907, AUTHOR = "Moreira, B.M. and Sousa, A.V. and Mendonca, A.M. and Campilho, A.", TITLE = "Lane Background Removal for the Classification of Thin-Layer Chromatography Images", BOOKTITLE = ICIAR13, YEAR = "2013", PAGES = "556-564", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223904"} @inproceedings{bb228908, AUTHOR = "Sousa, A.V. and Aguiar, R. and Mendonca, A.M. and Campilho, A.", TITLE = "Automatic Lane and Band Detection in Images of Thin Layer Chromatography", BOOKTITLE = ICIAR04, YEAR = "2004", PAGES = "II: 158-165", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223905"} @inproceedings{bb228909, AUTHOR = "Glory, E. and Faure, A. and Meas Yedid, V. and Cloppet, F. and Pinset, C. and Stamon, G. and Olivo Marin, J.C.", TITLE = "A Quantification Tool to Analyse Stained Cell Cultures", BOOKTITLE = ICIAR04, YEAR = "2004", PAGES = "II: 84-91", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223906"} @inproceedings{bb228910, AUTHOR = "Gajendran, V. and Rodriguez, J.J.", TITLE = "Chromosome counting via digital image analysis", BOOKTITLE = ICIP04, YEAR = "2004", PAGES = "V: 2929-2932", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223907"} @inproceedings{bb228911, AUTHOR = "Babu, S. and Liao, P.C. and Shin, M.C. and Tsap, L.V.", TITLE = "Towards Recovery of 3D Chromosome Structure", BOOKTITLE = Non-Rigid04, YEAR = "2004", PAGES = "1", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223908"} @inproceedings{bb228912, AUTHOR = "Kozubek, M. and Matula, P. and Eipel, H. and Hausmann, M.", TITLE = "Automated multi-view 3D image acquisition in human genome research", BOOKTITLE = "3DPVT02", YEAR = "2002", PAGES = "91-98", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223909"} @inproceedings{bb228913, AUTHOR = "Kozubek, M. and Matula, P. and Mejzlek, P.", TITLE = "High-resolution cytometry network project: Towards remote and distributed acquisition, processing and visualisation of 3D image data in human genome research", BOOKTITLE = "3DPVT02", YEAR = "2002", PAGES = "99-106", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223910"} @inproceedings{bb228914, AUTHOR = "Mousavi, P. and Fels, S. and Ward, R. and Lansdorp, P.", TITLE = "Classification of Homologous Human Chromosomes Using Mutual Information Maximization", BOOKTITLE = ICIP01, YEAR = "2001", PAGES = "II: 845-848", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223911"} @inproceedings{bb228915, AUTHOR = "Schwartzkopf, W.C. and Evans, B.L. and Bovik, A.C.", TITLE = "Entropy estimation for segmentation of multi-spectral chromosome images", BOOKTITLE = Southwest02, YEAR = "2002", PAGES = "234-237", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223912"} @inproceedings{bb228916, AUTHOR = "Schwartzkopf, W.C. and Evans, B.L. and Bovik, A.C.", TITLE = "Minimum Entropy Segmentation Applied to Multi-spectral Chromosome Images", BOOKTITLE = ICIP01, YEAR = "2001", PAGES = "II: 865-868", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223913"} @inproceedings{bb228917, AUTHOR = "Mousavi, P. and Ward, R.", TITLE = "Multi-feature Analysis and Classification of Human Chromosome Images Using Centromere Segmentation Algorithms", BOOKTITLE = ICIP00, YEAR = "2000", PAGES = "Vol I: 152-155", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223914"} @inproceedings{bb228918, AUTHOR = "Kyan, M. and Guan, L. and Arnison, M. and Cogswell, C.", TITLE = "Feature Extraction of Chromosomes from 3D Confocal Microscope images", BOOKTITLE = ICIP99, YEAR = "1999", PAGES = "II:843-847", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223915"} @inproceedings{bb228919, AUTHOR = "Karsligil, M.E. and Karsligil, M.Y.", TITLE = "Fuzzy Similarity Relations for Chromosome Classification and Identification", BOOKTITLE = CAIP99, YEAR = "1999", PAGES = "142-148", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223916"} @inproceedings{bb228920, AUTHOR = "Turmon, M. and Mukhtar, S.", TITLE = "Recognizing Chromospheric Objects via Markov Chain Monte Carlo", BOOKTITLE = ICIP97, YEAR = "1997", PAGES = "III: 320-323", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223917"} @inproceedings{bb228921, AUTHOR = "Eskiizmirliler, S. and Erkmen, A.M. and Basaran, F. and Nur Cakar, A.", TITLE = "A hybrid intelligent diagnostic system based on neural networks and image analysis techniques in the field of automated cytogenetics", BOOKTITLE = ICIP96, YEAR = "1996", PAGES = "I: 315-318", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223918"} @inproceedings{bb228922, AUTHOR = "Lerner, B. and Guterman, H. and Dinstein, I. and Romem, Y.", TITLE = "Feature selection and learning curves of a multilayer perceptron chromosome classifier", BOOKTITLE = ICPR94, YEAR = "1994", PAGES = "B:497-499", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223919"} @inproceedings{bb228923, AUTHOR = "Wiffen, L.N. and Kent, J.T.", TITLE = "The automatic classification of normal and abnormal chromosomes using image analysis", BOOKTITLE = CAIP93, YEAR = "1993", PAGES = "693-697", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223920"} @inproceedings{bb228924, AUTHOR = "Turner, M. and Austin, J. and Allinson, N.M. and Thompson, P.", TITLE = "Matching an Elastic Model of Chromosomal Shape to Features on a Self-Organising Map", BOOKTITLE = BMVC93, YEAR = "1993", PAGES = "xx-yy", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223921"} @inproceedings{bb228925, AUTHOR = "Turner, M. and Austin, J. and Allinson, N.M. and Thompson, P.", TITLE = "A Neural Network Approach to Recognition of Structural Aberrations in Chromosomes", BOOKTITLE = BMVC92, YEAR = "1992", PAGES = "xx-yy", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223922"} @inproceedings{bb228926, AUTHOR = "He, L. and Chai, Z.M.", TITLE = "Automatic detection of sister chromatid exchange", BOOKTITLE = ICPR88, YEAR = "1988", PAGES = "II: 652-654", BIBSOURCE = "http://www.visionbib.com/bibliography/medical849.html#TT223923"} @book{bb228927, TITLE = "CR Chisto Labeled Nuclei Dataset", PUBLISHER = "Online", YEAR = "2016", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223924"} @article{bb228928, AUTHOR = "Ott, R. and Schurmann, J. and Reinhardt, E.R. and Bloss, W.H.", TITLE = "Automated classification of cytological specimens based on features extracted from nuclei images", JOURNAL = PR, VOLUME = "13", YEAR = "1981", NUMBER = "1", PAGES = "83-87", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223925"} @article{bb228929, AUTHOR = "Bamford, P. and Lovell, B.C.", TITLE = "Unsupervised cell nucleus segmentation with active contours", JOURNAL = SP, VOLUME = "71", YEAR = "1998", NUMBER = "2", MONTH = "December", PAGES = "203-213", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223926"} @inproceedings{bb228930, AUTHOR = "Bamford, P. and Lovell, B.C.", TITLE = "Bayesian Analysis of Cell Nucleus Segmentation by a Viterbi Search Based Active Contour", BOOKTITLE = ICPR98, YEAR = "1998", PAGES = "Vol I: 133-135", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223927"} @inproceedings{bb228931, AUTHOR = "Bamford, P. and Lovell, B.C.", TITLE = "Improving the Robustness of Cell Nucleus Segmentation", BOOKTITLE = BMVC98, YEAR = "1998", PAGES = "xx-yy", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223928"} @article{bb228932, AUTHOR = "Yang, S. and Kohler, D. and Teller, K. and Cremer, T. and Le Baccon, P. and Heard, E. and Eils, R. and Rohr, K.", TITLE = "Nonrigid Registration of 3-D Multichannel Microscopy Images of Cell Nuclei", JOURNAL = IP, VOLUME = "17", YEAR = "2008", NUMBER = "4", MONTH = "April", PAGES = "493-499", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223929"} @article{bb228933, AUTHOR = "Kim, I.H. and Chen, Y.C.M. and Spector, D.L. and Eils, R. and Rohr, K.", TITLE = "Nonrigid Registration of 2-D and 3-D Dynamic Cell Nuclei Images for Improved Classification of Subcellular Particle Motion", JOURNAL = IP, VOLUME = "20", YEAR = "2011", NUMBER = "4", MONTH = "April", PAGES = "1011-1022", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223930"} @article{bb228934, AUTHOR = "McCullough, D.P. and Gudla, P.R. and Harris, B.S. and Collins, J.A. and Meaburn, K.J. and Nakaya, M.A. and Yamaguchi, T.P. and Misteli, T. and Lockett, S.J.", TITLE = "Segmentation of Whole Cells and Cell Nuclei From 3-D Optical Microscope Images Using Dynamic Programming", JOURNAL = MedImg, VOLUME = "27", YEAR = "2008", NUMBER = "5", MONTH = "May", PAGES = "723-734", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223931"} @article{bb228935, AUTHOR = "Yu, D.G. and Pham, T.D. and Zhou, X.B. and Wong, S.T.C.", TITLE = "Recognition and analysis of cell nuclear phases for high-content screening based on morphological features", JOURNAL = PR, VOLUME = "42", YEAR = "2009", NUMBER = "4", MONTH = "April", PAGES = "498-508", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223932"} @article{bb228936, AUTHOR = "Cloppet, F. and Boucher, A.", TITLE = "Segmentation of complex nucleus configurations in biological images", JOURNAL = PRL, VOLUME = "31", YEAR = "2010", NUMBER = "8", MONTH = "June", PAGES = "755-761", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223933"} @inproceedings{bb228937, AUTHOR = "Cloppet, F. and Boucher, A.", TITLE = "Segmentation of overlapping/aggregating nuclei cells in biological images", BOOKTITLE = ICPR08, YEAR = "2008", PAGES = "1-4", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223934"} @article{bb228938, AUTHOR = "Quelhas, P. and Marcuzzo, M. and Mendonca, A.M. and Campilho, A.", TITLE = "Cell Nuclei and Cytoplasm Joint Segmentation Using the Sliding Band Filter", JOURNAL = MedImg, VOLUME = "29", YEAR = "2010", NUMBER = "8", MONTH = "August", PAGES = "1463-1473", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223935"} @inproceedings{bb228939, AUTHOR = "Quelhas, P. and Mendonca, A.M. and Campilho, A.", TITLE = "3D Cell Nuclei Fluorescence Quantification Using Sliding Band Filter", BOOKTITLE = ICPR10, YEAR = "2010", PAGES = "2508-2511", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223936"} @inproceedings{bb228940, AUTHOR = "Marcuzzo, M. and Quelhas, P. and Mendonca, A.M. and Campilho, A.", TITLE = "Evaluation of Symmetry Enhanced Sliding Band Filter for Plant Cell Nuclei Detection in Low Contrast Noisy Fluorescent Images", BOOKTITLE = ICIAR09, YEAR = "2009", PAGES = "824-831", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223937"} @article{bb228941, AUTHOR = "Carleos, C. and Lopez Diaz, M.C. and Lopez Diaz, M.", TITLE = "A Stochastic Order of Shape Variability with an Application to Cell Nuclei Involved in Mastitis", JOURNAL = JMIV, VOLUME = "38", YEAR = "2010", NUMBER = "2", MONTH = "October", PAGES = "95-107", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223938"} @article{bb228942, AUTHOR = "Carleos, C. and Lopez Diaz, M.C. and Lopez Diaz, M.", TITLE = "Ranking Star-Shaped Valued Mappings with Respect to Shape Variability", JOURNAL = JMIV, VOLUME = "48", YEAR = "2014", NUMBER = "1", MONTH = "January", PAGES = "1-12", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223939"} @article{bb228943, AUTHOR = "Plissiti, M.E. and Nikou, C. and Charchanti, A.", TITLE = "Combining shape, texture and intensity features for cell nuclei extraction in Pap smear images", JOURNAL = PRL, VOLUME = "32", YEAR = "2011", NUMBER = "6", MONTH = "April", PAGES = "838-853", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223940"} @inproceedings{bb228944, AUTHOR = "Plissiti, M.E. and Vrigkas, M. and Nikou, C.", TITLE = "Segmentation of cell clusters in Pap smear images using intensity variation between superpixels", BOOKTITLE = WSSIP15, YEAR = "2015", PAGES = "184-187", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223941"} @article{bb228945, AUTHOR = "Wang, W. and Ozolek, J.A. and Slepcev, D. and Lee, A.B. and Chen, C. and Rohde, G.K.", TITLE = "An Optimal Transportation Approach for Nuclear Structure-Based Pathology", JOURNAL = MedImg, VOLUME = "30", YEAR = "2011", NUMBER = "3", MONTH = "March", PAGES = "621-631", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223942"} @article{bb228946, AUTHOR = "Ali, R. and Gooding, M. and Szilagyi, T. and Vojnovic, B. and Christlieb, M. and Brady, M.", TITLE = "Automatic segmentation of adherent biological cell boundaries and nuclei from brightfield microscopy images", JOURNAL = MVA, VOLUME = "23", YEAR = "2012", NUMBER = "4", MONTH = "July", PAGES = "607-621", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223943"} @article{bb228947, AUTHOR = "Wang, W. and Slepcev, D. and Basu, S. and Ozolek, J.A. and Rohde, G.K.", TITLE = "A Linear Optimal Transportation Framework for Quantifying and Visualizing Variations in Sets of Images", JOURNAL = IJCV, VOLUME = "101", YEAR = "2013", NUMBER = "2", MONTH = "January", PAGES = "254-269", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223944"} @article{bb228948, AUTHOR = "Kolouri, S. and Tosun, A.B. and Ozolek, J.A. and Rohde, G.K.", TITLE = "A continuous linear optimal transport approach for pattern analysis in image datasets", JOURNAL = PR, VOLUME = "51", YEAR = "2016", NUMBER = "1", PAGES = "453-462", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223945"} @article{bb228949, AUTHOR = "Han, J.W. and Breckon, T.P. and Randell, D.A. and Landini, G.", TITLE = "The application of support vector machine classification to detect cell nuclei for automated microscopy", JOURNAL = MVA, VOLUME = "23", YEAR = "2012", NUMBER = "1", MONTH = "January", PAGES = "15-24", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223946"} @article{bb228950, AUTHOR = "Esteves, T. and Quelhas, P. and Mendonca, A.M. and Campilho, A.", TITLE = "Gradient convergence filters and a phase congruency approach for in vivo cell nuclei detection", JOURNAL = MVA, VOLUME = "23", YEAR = "2012", NUMBER = "4", MONTH = "July", PAGES = "623-638", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223947"} @article{bb228951, AUTHOR = "Plissiti, M.E. and Nikou, C.", TITLE = "Overlapping Cell Nuclei Segmentation Using a Spatially Adaptive Active Physical Model", JOURNAL = IP, VOLUME = "21", YEAR = "2012", NUMBER = "11", MONTH = "November", PAGES = "4568-4580", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223948"} @article{bb228952, AUTHOR = "Chang, H. and Han, J. and Borowsky, A. and Loss, L. and Gray, J.W. and Spellman, P.T. and Parvin, B.", TITLE = "Invariant Delineation of Nuclear Architecture in Glioblastoma Multiforme for Clinical and Molecular Association", JOURNAL = MedImg, VOLUME = "32", YEAR = "2013", NUMBER = "4", MONTH = "April", PAGES = "670-682", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223949"} @article{bb228953, AUTHOR = "Moussavi, F. and Wang, Y. and Lorenzen, P. and Oakley, J. and Russakoff, D. and Gould, S.", TITLE = "A Unified Graphical Models Framework for Automated Mitosis Detection in Human Embryos", JOURNAL = MedImg, VOLUME = "33", YEAR = "2014", NUMBER = "7", MONTH = "July", PAGES = "1551-1562", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223950"} @article{bb228954, AUTHOR = "Widmer, C. and Heinrich, S. and Drewe, P. and Lou, X.H. and Umrania, S. and Ratsch, G.", TITLE = "Graph-regularized 3D shape reconstruction from highly anisotropic and noisy images", JOURNAL = SIViP, VOLUME = "8", YEAR = "2014", NUMBER = "S1", MONTH = "December", PAGES = "41-48", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223951"} @article{bb228955, AUTHOR = "Pecot, T. and Bouthemy, P. and Boulanger, J. and Chessel, A. and Bardin, S. and Salamero, J. and Kervrann, C.", TITLE = "Background Fluorescence Estimation and Vesicle Segmentation in Live Cell Imaging With Conditional Random Fields", JOURNAL = IP, VOLUME = "24", YEAR = "2015", NUMBER = "2", MONTH = "February", PAGES = "667-680", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223952"} @article{bb228956, AUTHOR = "Paul, A. and Mukherjee, D.P.", TITLE = "Mitosis Detection for Invasive Breast Cancer Grading in Histopathological Images", JOURNAL = IP, VOLUME = "24", YEAR = "2015", NUMBER = "11", MONTH = "November", PAGES = "4041-4054", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223953"} @article{bb228957, AUTHOR = "Zhang, W. and Fehrenbach, J. and Desmaison, A. and Lobjois, V. and Ducommun, B. and Weiss, P.", TITLE = "Structure Tensor Based Analysis of Cells and Nuclei Organization in Tissues", JOURNAL = MedImg, VOLUME = "35", YEAR = "2016", NUMBER = "1", MONTH = "January", PAGES = "294-306", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223954"} @article{bb228958, AUTHOR = "Bejnordi, B.E. and Litjens, G. and Timofeeva, N. and Otte Holler, I. and Homeyer, A. and Karssemeijer, N. and van der Laak, J.A.W.M.", TITLE = "Stain Specific Standardization of Whole-Slide Histopathological Images", JOURNAL = MedImg, VOLUME = "35", YEAR = "2016", NUMBER = "2", MONTH = "February", PAGES = "404-415", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223955"} @article{bb228959, AUTHOR = "Gharipour, A. and Liew, A.W.C.", TITLE = "Segmentation of cell nuclei in fluorescence microscopy images: An integrated framework using level set segmentation and touching-cell splitting", JOURNAL = PR, VOLUME = "58", YEAR = "2016", NUMBER = "1", PAGES = "1-11", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223956"} @article{bb228960, AUTHOR = "Ram, S. and Rodriguez, J.J.", TITLE = "Size-Invariant Detection of Cell Nuclei in Microscopy Images", JOURNAL = MedImg, VOLUME = "35", YEAR = "2016", NUMBER = "7", MONTH = "July", PAGES = "1753-1764", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223957"} @inproceedings{bb228961, AUTHOR = "Ram, S. and Nguyen, V.T. and Limesand, K.H. and Rodriguez, J.J.", TITLE = "Combined Detection and Segmentation of Cell Nuclei in Microscopy Images Using Deep Learning", BOOKTITLE = "SSIAI20", YEAR = "2020", PAGES = "26-29", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223958"} @article{bb228962, AUTHOR = "Shahul Hameed, K.A. and Banumathi, A. and Ulaganathan, G.", TITLE = "P53immunostained cell nuclei segmentation in tissue images of oral squamous cell carcinoma", JOURNAL = SIViP, VOLUME = "11", YEAR = "2017", NUMBER = "2", MONTH = "February", PAGES = "363-370", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223959"} @article{bb228963, AUTHOR = "Zhang, W.J. and Li, H.Q.", TITLE = "Automated segmentation of overlapped nuclei using concave point detection and segment grouping", JOURNAL = PR, VOLUME = "71", YEAR = "2017", NUMBER = "1", PAGES = "349-360", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223960"} @article{bb228964, AUTHOR = "Kumar, N. and Verma, R. and Sharma, S. and Bhargava, S. and Vahadane, A. and Sethi, A.", TITLE = "A Dataset and a Technique for Generalized Nuclear Segmentation for Computational Pathology", JOURNAL = MedImg, VOLUME = "36", YEAR = "2017", NUMBER = "7", MONTH = "July", PAGES = "1550-1560", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223961"} @article{bb228965, AUTHOR = "Song, J. and Xiao, L. and Lian, Z.", TITLE = "Contour-Seed Pairs Learning-Based Framework for Simultaneously Detecting and Segmenting Various Overlapping Cells/Nuclei in Microscopy Images", JOURNAL = IP, VOLUME = "27", YEAR = "2018", NUMBER = "12", MONTH = "December", PAGES = "5759-5774", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223962"} @article{bb228966, AUTHOR = "Sorokin, D.V. and Peterlik, I. and Tektonidis, M. and Rohr, K. and Matula, P.", TITLE = "Non-Rigid Contour-Based Registration of Cell Nuclei in 2-D Live Cell Microscopy Images Using a Dynamic Elasticity Model", JOURNAL = MedImg, VOLUME = "37", YEAR = "2018", NUMBER = "1", MONTH = "January", PAGES = "173-184", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223963"} @article{bb228967, AUTHOR = "Kurmi, Y. and Chaurasia, V.", TITLE = "Multifeature-based medical image segmentation", JOURNAL = IET-IPR, VOLUME = "12", YEAR = "2018", NUMBER = "8", MONTH = "August", PAGES = "1491-1498", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223964"} @article{bb228968, AUTHOR = "Nie, W.Z. and Yan, Y. and Hao, T. and Liu, C.C. and Su, Y.T.", TITLE = "Mitosis event recognition and detection based on evolution of feature in time domain", JOURNAL = MVA, VOLUME = "29", YEAR = "2018", NUMBER = "8", MONTH = "November", PAGES = "1249-1256", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223965"} @article{bb228969, AUTHOR = "Hou, L. and Nguyen, V. and Kanevsky, A.B. and Samaras, D. and Kurc, T.M. and Zhao, T.H. and Gupta, R.R. and Gao, Y. and Chen, W.J. and Foran, D. and Saltz, J.H.", TITLE = "Sparse autoencoder for unsupervised nucleus detection and representation in histopathology images", JOURNAL = PR, VOLUME = "86", YEAR = "2019", PAGES = "188-200", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223966"} @article{bb228970, AUTHOR = "Shi, J. and Zheng, X. and Wu, J.J. and Gong, B.M. and Zhang, Q. and Ying, S.H.", TITLE = "Quaternion Grassmann average network for learning representation of histopathological image", JOURNAL = PR, VOLUME = "89", YEAR = "2019", PAGES = "67-76", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223967"} @inproceedings{bb228971, AUTHOR = "Wu, J.J. and Shi, J. and Ying, S.H. and Zhang, Q. and Li, Y.", TITLE = "Learning Representation for Histopathological Image with Quaternion Grassmann Average Network", BOOKTITLE = MLMI16, YEAR = "2016", PAGES = "122-129", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223968"} @article{bb228972, AUTHOR = "Naylor, P. and Lae, M. and Reyal, F. and Walter, T.", TITLE = "Segmentation of Nuclei in Histopathology Images by Deep Regression of the Distance Map", JOURNAL = MedImg, VOLUME = "38", YEAR = "2019", NUMBER = "2", MONTH = "February", PAGES = "448-459", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223969"} @article{bb228973, AUTHOR = "Tofighi, M. and Guo, T. and Vanamala, J.K.P. and Monga, V.", TITLE = "Prior Information Guided Regularized Deep Learning for Cell Nucleus Detection", JOURNAL = MedImg, VOLUME = "38", YEAR = "2019", NUMBER = "9", MONTH = "September", PAGES = "2047-2058", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223970"} @article{bb228974, AUTHOR = "Gao, Q. and Rohr, K.", TITLE = "A Global Method for Non-Rigid Registration of Cell Nuclei in Live Cell Time-Lapse Images", JOURNAL = MedImg, VOLUME = "38", YEAR = "2019", NUMBER = "10", MONTH = "October", PAGES = "2259-2270", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223971"} @article{bb228975, AUTHOR = "Kumar, N. and Verma, R. and Anand, D. and Zhou, Y.N. and Onder, O.F. and Tsougenis, E. and Chen, H. and Heng, P.A. and Li, J.H. and Hu, Z.Q. and Wang, Y.Z. and Koohbanani, N.A. and Jahanifar, M. and Tajeddin, N.Z. and Gooya, A. and Rajpoot, N. and Ren, X. and Zhou, S.H. and Wang, Q. and Shen, D.G. and Yang, C.K. and Weng, C.H. and Yu, W.H. and Yeh, C.Y. and Yang, S. and Xu, S. and Yeung, P.H. and Sun, P. and Mahbod, A. and Schaefer, G. and Ellinger, I. and Ecker, R. and Smedby, O. and Wang, C.L. and Chidester, B. and Ton, T.V. and Tran, M.T. and Ma, J. and Do, M.N. and Graham, S. and Vu, Q.D. and Kwak, J.T. and Gunda, A. and Chunduri, R. and Hu, C. and Zhou, X.Y. and Lotfi, D. and Safdari, R. and Kascenas, A. and O'Neil, A. and Eschweiler, D. and Stegmaier, J. and Cui, Y.P. and Yin, B.C. and Chen, K. and Tian, X.M. and Gruening, P. and Barth, E. and Arbel, E. and Remer, I. and Ben Dor, A. and Sirazitdinova, E. and Kohl, M. and Braunewell, S. and Li, Y.X. and Xie, X.P. and Shen, L.L. and Ma, J. and Baksi, K.D. and Khan, M.A. and Choo, J. and Colomer, A. and Naranjo, V. and Pei, L.M. and Iftekharuddin, K.M. and Roy, K. and Bhattacharjee, D. and Pedraza, A. and Bueno, M.G. and Devanathan, S. and Radhakrishnan, S. and Koduganty, P. and Wu, Z.H. and Cai, G.Y. and Liu, X.J. and Wang, Y.Q. and Sethi, A.", TITLE = "A Multi-Organ Nucleus Segmentation Challenge", JOURNAL = MedImg, VOLUME = "39", YEAR = "2020", NUMBER = "5", MONTH = "May", PAGES = "1380-1391", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223972"} @article{bb228976, AUTHOR = "Su, Y.T. and Lu, Y. and Liu, J. and Chen, M. and Liu, A.A.", TITLE = "Spatio-Temporal Mitosis Detection in Time-Lapse Phase-Contrast Microscopy Image Sequences: A Benchmark", JOURNAL = MedImg, VOLUME = "40", YEAR = "2021", NUMBER = "5", MONTH = "May", PAGES = "1319-1328", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223973"} @article{bb228977, AUTHOR = "Xing, F.Y. and Cornish, T.C. and Bennett, T.D. and Ghosh, D.", TITLE = "Bidirectional Mapping-Based Domain Adaptation for Nucleus Detection in Cross-Modality Microscopy Images", JOURNAL = MedImg, VOLUME = "40", YEAR = "2021", NUMBER = "10", MONTH = "October", PAGES = "2880-2896", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223974"} @article{bb228978, AUTHOR = "Verma, R. and Kumar, N. and Patil, A. and Kurian, N.C. and Rane, S. and Graham, S. and Vu, Q.D. and Zwager, M. and Raza, S.E.A. and Rajpoot, N. and Wu, X. and Chen, H. and Huang, Y.J. and Wang, L.S. and Jung, H. and Brown, G.T. and Liu, Y.L. and Liu, S. and Jahromi, S.A.F. and Khani, A.A. and Montahaei, E. and Baghshah, M.S. and Behroozi, H. and Semkin, P. and Rassadin, A. and Dutande, P. and Lodaya, R. and Baid, U. and Baheti, B. and Talbar, S. and Mahbod, A. and Ecker, R. and Ellinger, I. and Luo, Z.P. and Dong, B. and Xu, Z.Y. and Yao, Y.H. and Lv, S. and Feng, M. and Xu, K. and Zunair, H. and Ben Hamza, A. and Smiley, S. and Yin, T.K. and Fang, Q.R. and Srivastava, S. and Mahapatra, D. and Trnavska, L. and Zhang, H.Y. and Narayanan, P.L. and Law, J. and Yuan, Y. and Tejomay, A. and Mitkari, A. and Koka, D. and Ramachandra, V. and Kini, L. and Sethi, A.", TITLE = "MoNuSAC2020: A Multi-Organ Nuclei Segmentation and Classification Challenge", JOURNAL = MedImg, VOLUME = "40", YEAR = "2021", NUMBER = "12", MONTH = "December", PAGES = "3413-3423", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223975"} @article{bb228979, AUTHOR = "Verma, R. and Kumar, N. and Patil, A. and Kurian, N.C. and Rane, S. and Sethi, A.", TITLE = "Author's Reply to 'MoNuSAC2020: A Multi-Organ Nuclei Segmentation and Classification Challenge'", JOURNAL = MedImg, VOLUME = "41", YEAR = "2022", NUMBER = "4", MONTH = "April", PAGES = "1000-1003", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223976"} @article{bb228980, AUTHOR = "Foucart, A. and Debeir, O. and Decaestecker, C.", TITLE = "Comments on 'MoNuSAC2020: A Multi-Organ Nuclei Segmentation and Classification Challenge'", JOURNAL = MedImg, VOLUME = "41", YEAR = "2022", NUMBER = "4", MONTH = "April", PAGES = "997-999", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223977"} @article{bb228981, AUTHOR = "Liu, S.S. and Hu, R. and Wu, J. and Zhang, X. and He, J. and Zhao, H.M. and Wang, H. and Li, X.J.", TITLE = "Research on data classification and feature fusion method of cancer nuclei image based on deep learning", JOURNAL = IJIST, VOLUME = "32", YEAR = "2022", NUMBER = "3", PAGES = "969-981", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223978"} @article{bb228982, AUTHOR = "Khan, R. and Debnath, R.", TITLE = "Morphology Preserving Segmentation Method for Occluded Cell Nuclei from Medical Microscopy Image", JOURNAL = IJIG, VOLUME = "22", YEAR = "2022", NUMBER = "2", MONTH = "April", PAGES = "2250019", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223979"} @article{bb228983, AUTHOR = "Li, Y.H. and Xue, Y. and Li, L.F. and Zhang, X.J. and Qian, X.M.", TITLE = "Domain Adaptive Box-Supervised Instance Segmentation Network for Mitosis Detection", JOURNAL = MedImg, VOLUME = "41", YEAR = "2022", NUMBER = "9", MONTH = "September", PAGES = "2469-2485", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223980"} @article{bb228984, AUTHOR = "Chen, S.C. and Ding, C.X. and Liu, M.F. and Cheng, J. and Tao, D.C.", TITLE = "CPP-Net: Context-Aware Polygon Proposal Network for Nucleus Segmentation", JOURNAL = IP, VOLUME = "32", YEAR = "2023", PAGES = "980-994", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223981"} @article{bb228985, AUTHOR = "Wang, J. and Zhang, Z. and Wu, M. and Ye, Y.G. and Wang, S. and Cao, Y. and Yang, H.", TITLE = "Improved BlendMask: Nuclei instance segmentation for medical microscopy images", JOURNAL = IET-IPR, VOLUME = "17", YEAR = "2023", NUMBER = "7", PAGES = "2284-2296", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223982"} @article{bb228986, AUTHOR = "Zhou, Y. and Wu, Y.J. and Wang, Z. and Wei, B.Z. and Lai, M. and Shou, J.Z. and Fan, Y. and Xu, Y.", TITLE = "Cyclic Learning: Bridging Image-Level Labels and Nuclei Instance Segmentation", JOURNAL = MedImg, VOLUME = "42", YEAR = "2023", NUMBER = "10", MONTH = "October", PAGES = "3104-3116", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223983"} @article{bb228987, AUTHOR = "Wu, H. and Wang, Z.Z. and Zhao, Z.B. and Chen, C. and Qin, J.", TITLE = "Continual Nuclei Segmentation via Prototype-Wise Relation Distillation and Contrastive Learning", JOURNAL = MedImg, VOLUME = "42", YEAR = "2023", NUMBER = "12", MONTH = "December", PAGES = "3794-3804", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223984"} @article{bb228988, AUTHOR = "Lim, S. and Xu, Z.X. and Chong, Y. and Jung, S.W.", TITLE = "CAWM: Class-Aware Weight Map for Improved Semi-Supervised Nuclei Segmentation", JOURNAL = SPLetters, VOLUME = "31", YEAR = "2024", PAGES = "81-85", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223985"} @article{bb228989, AUTHOR = "Zhou, H.Y. and Feng, B. and Chen, H.B.", TITLE = "Segmentation of nucleus based on dynamic convolution and deep features of stain distribution", JOURNAL = IET-IPR, VOLUME = "18", YEAR = "2024", NUMBER = "4", PAGES = "939-950", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223986"} @inproceedings{bb228990, AUTHOR = "Huang, J. and Li, H.F. and Wan, X. and Li, G.B.", TITLE = "Affine-Consistent Transformer for Multi-Class Cell Nuclei Detection", BOOKTITLE = ICCV23, YEAR = "2023", PAGES = "21327-21336", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223987"} @inproceedings{bb228991, AUTHOR = "Utz, J. and Weise, T. and Schlereth, M. and Wagner, F. and Thies, M. and Gu, M.X. and Uderhardt, S. and Breininger, K.", TITLE = "Focus on Content not Noise: Improving Image Generation for Nuclei Segmentation by Suppressing Steganography in CycleGAN", BOOKTITLE = BioIm23, YEAR = "2023", PAGES = "3858-3866", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223988"} @inproceedings{bb228992, AUTHOR = "Hassan, T. and Abdalla, M. and Raja, H. and Owais, M. and Werghi, N.", TITLE = "Robust Nucleus Classification with Iterative Graph Representational Learning", BOOKTITLE = ICIP23, YEAR = "2023", PAGES = "3414-3418", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223989"} @inproceedings{bb228993, AUTHOR = "Han, Y. and Lei, Y. and Shkolnikov, V. and Xin, D. and Auduong, A. and Barcelo, S. and Allebach, J. and Delp, E.J.", TITLE = "An Ensemble Method with Edge Awareness for Abnormally Shaped Nuclei Segmentation", BOOKTITLE = CVMI23, YEAR = "2023", PAGES = "4315-4325", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223990"} @inproceedings{bb228994, AUTHOR = "Bonte, T. and Philbert, M. and Coleno, E. and Bertrand, E. and Imbert, A. and Walter, T.", TITLE = "Learning with Minimal Effort: Leveraging in Silico Labeling for Cell and Nucleus Segmentation", BOOKTITLE = BioImage22, YEAR = "2022", PAGES = "423-436", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223991"} @inproceedings{bb228995, AUTHOR = "Magoulianitis, V. and Han, P. and Yang, Y.J. and Kuo, C.C.J.", TITLE = "An Unsupervised Parameter-Free Nuclei Segmentation Method for Histology Images", BOOKTITLE = ICIP22, YEAR = "2022", PAGES = "226-230", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223992"} @inproceedings{bb228996, AUTHOR = "Habis, A. and Meas Yedid, V. and Obando, D.F.G. and Olivo Marin, J.C. and Angelini, E.D.", TITLE = "Smart Learning of Click and Refine for Nuclei Segmentation on Histology Images", BOOKTITLE = ICIP22, YEAR = "2022", PAGES = "2281-2285", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223993"} @inproceedings{bb228997, AUTHOR = "Zhao, W. and Zhou, X.", TITLE = "Bi-Polar Mask for Joint Cell and Nuclei Instance Segmentation", BOOKTITLE = ICIP22, YEAR = "2022", PAGES = "3421-3425", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223994"} @inproceedings{bb228998, AUTHOR = "Wu, L.M. and Chen, A. and Salama, P. and Dunn, K.W. and Delp, E.J.", TITLE = "3D Centroidnet: Nuclei Centroid Detection with Vector Flow Voting", BOOKTITLE = ICIP22, YEAR = "2022", PAGES = "651-655", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223995"} @inproceedings{bb228999, AUTHOR = "Wu, L.M. and Chen, A. and Salama, P. and Dunn, K.W. and Delp, E.J.", TITLE = "An Ensemble Learning and Slice Fusion Strategy for Three-Dimensional Nuclei Instance Segmentation", BOOKTITLE = CVMI22, YEAR = "2022", PAGES = "1883-1893", BIBSOURCE = "http://www.visionbib.com/bibliography/medical850tr1.html#TT223996"}