@inproceedings{bb254200,
        AUTHOR = "Bragantini, J. and Lange, M. and Royer, L.",
        TITLE = "Large-scale Multi-hypotheses Cell Tracking Using Ultrametric Contours
Maps",
        BOOKTITLE = ECCV24,
        YEAR = "2024",
        PAGES = "LXXIX: 36-54",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249088"}

@inproceedings{bb254201,
        AUTHOR = "Acharya, S. and Ganguly, A. and Sarkar, R. and Jose, A.",
        TITLE = "Cell Cycle State Prediction Using Graph Neural Networks",
        BOOKTITLE = ICIP24,
        YEAR = "2024",
        PAGES = "2916-2922",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249089"}

@inproceedings{bb254202,
        AUTHOR = "Weijler, L. and Kowarsch, F. and Reiter, M. and Hermosilla, P. and Maurer Granofszky, M. and Dworzak, M.",
        TITLE = "FATE: Feature-Agnostic Transformer-based Encoder for learning
generalized embedding spaces in flow cytometry data",
        BOOKTITLE = WACV24,
        YEAR = "2024",
        PAGES = "7941-7949",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249090"}

@inproceedings{bb254203,
        AUTHOR = "Reich, C. and Prangemeier, T. and Koeppl, H.",
        TITLE = "The TYC Dataset for Understanding Instance-Level Semantics and
Motions of Cells in Microstructures",
        BOOKTITLE = BioIm23,
        YEAR = "2023",
        PAGES = "3942-3953",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249091"}

@inproceedings{bb254204,
        AUTHOR = "Jang, J.B. and Lee, K. and Kim, T.K.",
        TITLE = "Unsupervised Contour Tracking of Live Cells by Mechanical and Cycle
Consistency Losses",
        BOOKTITLE = CVPR23,
        YEAR = "2023",
        PAGES = "227-236",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249092"}

@inproceedings{bb254205,
        AUTHOR = "Bribiesca Sanchez, A. and Guzman, A. and Darszon, A. and Corkidi, G. and Bribiesca, E.",
        TITLE = "A Measure of Tortuosity for 3d Curves: Identifying 3d Beating Patterns
of Sperm Flagella",
        BOOKTITLE = IbPRIA23,
        YEAR = "2023",
        PAGES = "363-374",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249093"}

@inproceedings{bb254206,
        AUTHOR = "Ben Haim, T. and Raviv, T.R.",
        TITLE = "Graph Neural Network for Cell Tracking in Microscopy Videos",
        BOOKTITLE = ECCV22,
        YEAR = "2022",
        PAGES = "XXI:610-626",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249094"}

@inproceedings{bb254207,
        AUTHOR = "Harmanec, A. and Kadlecova, Z. and Sroubek, F.",
        TITLE = "Novel Reconstruction With Inter-Frame Motion Compensation For Fast
Super-Resolution Live Cell Imaging",
        BOOKTITLE = ICIP22,
        YEAR = "2022",
        PAGES = "3211-3215",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249095"}

@inproceedings{bb254208,
        AUTHOR = "Hayashida, J. and Nishimura, K. and Bise, R.",
        TITLE = "Consistent Cell Tracking in Multi-frames with Spatio-Temporal Context
by Object-Level Warping Loss",
        BOOKTITLE = WACV22,
        YEAR = "2022",
        PAGES = "1759-1768",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249096"}

@inproceedings{bb254209,
        AUTHOR = "Deng, X. and Sarkar, R. and Labruyere, E. and Olivo Marin, J.C. and Srivastava, A.",
        TITLE = "Modeling Shape Dynamics During Cell Motility in Microscopy Videos",
        BOOKTITLE = ICIP20,
        YEAR = "2020",
        PAGES = "2491-2495",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249097"}

@inproceedings{bb254210,
        AUTHOR = "Nishimura, K. and Hayashida, J. and Wang, C.Y. and Ker, D.F.E. and Bise, R.",
        TITLE = "Weakly-supervised Cell Tracking via Backward-and-forward Propagation",
        BOOKTITLE = ECCV20,
        YEAR = "2020",
        PAGES = "XII: 104-121",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249098"}

@inproceedings{bb254211,
        AUTHOR = "Hayashida, J. and Nishimura, K. and Bise, R.",
        TITLE = "MPM: Joint Representation of Motion and Position Map for Cell
Tracking",
        BOOKTITLE = CVPR20,
        YEAR = "2020",
        PAGES = "3822-3831",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249099"}

@inproceedings{bb254212,
        AUTHOR = "Anjum, S. and Gurari, D.",
        TITLE = "CTMC: Cell Tracking with Mitosis Detection Dataset Challenge",
        BOOKTITLE = Microscopy20,
        YEAR = "2020",
        PAGES = "4228-4237",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249100"}

@inproceedings{bb254213,
        AUTHOR = "Almakady, Y. and Mahmoodi, S.",
        TITLE = "Texture-Based Region Tracking Using Gaussian Markov Random Fields for
Cilia Motion Analysis",
        BOOKTITLE = ICIP19,
        YEAR = "2019",
        PAGES = "1292-1296",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249101"}

@inproceedings{bb254214,
        AUTHOR = "Ram, S. and Majdi, M.S. and Rodriguez, J.J. and Gao, Y. and Brooks, H.L.",
        TITLE = "Classification of Primary Cilia in Microscopy Images Using
Convolutional Neural Random Forests",
        BOOKTITLE = Southwest18,
        YEAR = "2018",
        PAGES = "89-92",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249102"}

@inproceedings{bb254215,
        AUTHOR = "Dewan, K. and Dastidar, T.R. and Ahmad, M.",
        TITLE = "Estimation of Sperm Concentration and Total Motility from Microscopic
Videos of Human Semen Samples",
        BOOKTITLE = Microscopy18,
        YEAR = "2018",
        PAGES = "2380-23807",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249103"}

@inproceedings{bb254216,
        AUTHOR = "Shaker, F. and Monadjemi, S.A. and Alirezaie, J.",
        TITLE = "Classification of human sperm heads using elliptic features and LDA",
        BOOKTITLE = IPRIA17,
        YEAR = "2017",
        PAGES = "151-155",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249104"}

@inproceedings{bb254217,
        AUTHOR = "Rempfler, M. and Lange, J.H. and Jug, F. and Blasse, C. and Myers, E.W. and Menze, B.H. and Andres, B.",
        TITLE = "Efficient Algorithms for Moral Lineage Tracing",
        BOOKTITLE = ICCV17,
        YEAR = "2017",
        PAGES = "4705-4714",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249105"}

@inproceedings{bb254218,
        AUTHOR = "Maska, M. and Matula, P.",
        TITLE = "Particle Tracking Accuracy Measurement Based on Comparison of Linear
Oriented Forests",
        BOOKTITLE = BioIm17,
        YEAR = "2017",
        PAGES = "11-17",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249106"}

@inproceedings{bb254219,
        AUTHOR = "Fortun, D. and Debroux, N. and Kervrann, C.",
        TITLE = "Spatially-Variant Kernel for Optical Flow Under Low Signal-to-Noise
Ratios Application to Microscopy",
        BOOKTITLE = BioIm17,
        YEAR = "2017",
        PAGES = "42-48",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249107"}

@inproceedings{bb254220,
        AUTHOR = "Selka, F. and Blein, T. and Burguet, J. and Biot, E. and Laufs, P. and Andrey, P.",
        TITLE = "Towards a Spatio-Temporal Atlas of 3D Cellular Parameters During Leaf
Morphogenesis",
        BOOKTITLE = BioIm17,
        YEAR = "2017",
        PAGES = "56-63",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249108"}

@inproceedings{bb254221,
        AUTHOR = "Lai, Y. and Kamata, S.i. and Fu, Z.",
        TITLE = "Robust registration of serial cell microscopic images using 3D
Hilbert scan search",
        BOOKTITLE = MVA17,
        YEAR = "2017",
        PAGES = "530-533",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249109"}

@inproceedings{bb254222,
        AUTHOR = "Jug, F. and Levinkov, E. and Blasse, C. and Myers, E.W. and Andres, B.",
        TITLE = "Moral Lineage Tracing",
        BOOKTITLE = CVPR16,
        YEAR = "2016",
        PAGES = "5926-5935",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249110"}

@inproceedings{bb254223,
        AUTHOR = "Matuszewski, D.J. and Sintorn, I.M. and Puigvert, J.C. and Wahlby, C.",
        TITLE = "Comparison of Flow Cytometry and Image-Based Screening for Cell Cycle
Analysis",
        BOOKTITLE = ICIAR16,
        YEAR = "2016",
        PAGES = "623-630",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249111"}

@inproceedings{bb254224,
        AUTHOR = "Medina Rodriguez, R. and Guzman Masias, L. and Alatrista Salas, H. and Beltran Castanon, C.",
        TITLE = "Sperm Cells Segmentation in Micrographic Images Through Lambertian
Reflectance Model",
        BOOKTITLE = CAIP15,
        YEAR = "2015",
        PAGES = "II:664-674",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249112"}

@inproceedings{bb254225,
        AUTHOR = "Cheng, J.R. and Xiong, W. and Gu, Y. and Chia, S.C. and Wang, Y. and Lim, J.H.",
        TITLE = "A Three-Color Coupled Level-Set Algorithm for Simultaneous Multiple
Cell Segmentation and Tracking",
        BOOKTITLE = ACCV14,
        YEAR = "2014",
        PAGES = "III: 268-283",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249113"}

@inproceedings{bb254226,
        AUTHOR = "Ramesh, N. and Tasdizen, T.",
        TITLE = "Cell tracking using particle filters with implicit convex shape model
in 4D confocal microscopy images",
        BOOKTITLE = ICIP14,
        YEAR = "2014",
        PAGES = "446-450",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249114"}

@inproceedings{bb254227,
        AUTHOR = "Chakraborty, A. and Roy Chowdhury, A.K.",
        TITLE = "A conditional random field model for tracking in densely packed cell
structures",
        BOOKTITLE = ICIP14,
        YEAR = "2014",
        PAGES = "451-455",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249115"}

@inproceedings{bb254228,
        AUTHOR = "Saha, B.N. and Ray, N. and McArdle, S. and Ley, K.",
        TITLE = "A two-stage minimum spanning tree (MST) based clustering algorithm
for 2D deformable registration of time sequenced images",
        BOOKTITLE = ICIP17,
        YEAR = "2017",
        PAGES = "1472-1476",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249116"}

@inproceedings{bb254229,
        AUTHOR = "McArdle, S. and Acton, S.T. and Ley, K. and Ray, N.",
        TITLE = "Registering sequences of in vivo microscopy images for cell tracking
using dynamic programming and minimum spanning trees",
        BOOKTITLE = ICIP14,
        YEAR = "2014",
        PAGES = "3547-3551",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249117"}

@inproceedings{bb254230,
        AUTHOR = "Esteves, T. and Carvalho, A. and Monteiro, F.J. and Quelhas, P.",
        TITLE = "Periodic Background Pattern Detection and Removal for Cell Tracking",
        BOOKTITLE = ICIAR14,
        YEAR = "2014",
        PAGES = "II: 123-131",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249118"}

@inproceedings{bb254231,
        AUTHOR = "Okabe, T. and Hotta, K.",
        TITLE = "Accuracy Improvement of Melanosome Tracking by Error Correction",
        BOOKTITLE = DICTA13,
        YEAR = "2013",
        PAGES = "1-8",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249119"}

@inproceedings{bb254232,
        AUTHOR = "Kausler, B.X. and Schiegg, M. and Andres, B. and Lindner, M. and Koethe, U. and Leitte, H. and Wittbrodt, J. and Hufnagel, L. and Hamprecht, F.A.",
        TITLE = "A Discrete Chain Graph Model for 3d+t Cell Tracking with High
Misdetection Robustness",
        BOOKTITLE = ECCV12,
        YEAR = "2012",
        PAGES = "III: 144-157",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249120"}

@inproceedings{bb254233,
        AUTHOR = "Wang, Q. and Ou, Y. and Julius, A.A. and Boyer, K.L. and Kim, M.J.",
        TITLE = "Tracking Tetrahymena pyriformis cells using decision trees",
        BOOKTITLE = ICPR12,
        YEAR = "2012",
        PAGES = "1843-1847",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249121"}

@inproceedings{bb254234,
        AUTHOR = "Chowdhury, A.S. and Paul, A. and Bunyak, F. and Cornelison, D.D.W. and Palaniappan, K.",
        TITLE = "Semi-automated tracking of muscle satellite cells in brightfield
microscopy video",
        BOOKTITLE = ICIP12,
        YEAR = "2012",
        PAGES = "2825-2828",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249122"}

@inproceedings{bb254235,
        AUTHOR = "Saha, U. and Singh, R.",
        TITLE = "Vision-based Tracking of Complex Macroparasites for High-content
Phenotypic Drug Screening",
        BOOKTITLE = ISVC12,
        YEAR = "2012",
        PAGES = "II: 104-114",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249123"}

@inproceedings{bb254236,
        AUTHOR = "Garcia Olalla, O. and Alegre, E. and Fernandez Robles, L. and Garcia Ordas, M.T.",
        TITLE = "Vitality Assessment of Boar Sperm Using an Adaptive LBP Based on
Oriented Deviation",
        BOOKTITLE = CVLBP12,
        YEAR = "2012",
        PAGES = "I:61-72",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249124"}

@inproceedings{bb254237,
        AUTHOR = "Gonzalez Castro, V. and Alegre, E. and Garcia Olalla, O. and Garcia Ordas, D. and Garcia Ordas, M.T. and Fernandez Robles, L.",
        TITLE = "Curvelet-Based Texture Description to Classify Intact and Damaged Boar
Spermatozoa",
        BOOKTITLE = ICIAR12,
        YEAR = "2012",
        PAGES = "II: 448-455",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249125"}

@inproceedings{bb254238,
        AUTHOR = "Mkrtchyan, K. and Singh, D. and Liu, M. and Reddy, V. and Roy Chowdhury, A. and Gopi, M.",
        TITLE = "Efficient cell segmentation and tracking of developing plant meristem",
        BOOKTITLE = ICIP11,
        YEAR = "2011",
        PAGES = "2165-2168",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249126"}

@inproceedings{bb254239,
        AUTHOR = "Chowdhury, A.S. and Chatterjee, R. and Ghosh, M. and Ray, N.",
        TITLE = "Cell Tracking in Video Microscopy Using Bipartite Graph Matching",
        BOOKTITLE = ICPR10,
        YEAR = "2010",
        PAGES = "2456-2459",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249127"}

@inproceedings{bb254240,
        AUTHOR = "Iwanowski, M. and Korzynska, A.",
        TITLE = "Segmentation of Moving Cells in Bright Field and Epi-Fluorescent
Microscopic Image Sequences",
        BOOKTITLE = ICCVG10,
        YEAR = "2010",
        PAGES = "I: 401-410",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249128"}

@inproceedings{bb254241,
        AUTHOR = "Ong, L.L.S. and Ang, M.H. and Asada, H.H.",
        TITLE = "Tracking of cell population from time lapse and end point confocal
microscopy images with multiple hypothesis Kalman smoothing filters",
        BOOKTITLE = MMBIA10,
        YEAR = "2010",
        PAGES = "71-78",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249129"}

@inproceedings{bb254242,
        AUTHOR = "Thirusittampalam, K. and Hossain, M.J. and Ghita, O. and Whelan, P.F.",
        TITLE = "A Novel Framework for Tracking In-vitro Cells in Time-lapse Phase
Contrast Data",
        BOOKTITLE = BMVC10,
        YEAR = "2010",
        PAGES = "xx-yy",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249130"}

@inproceedings{bb254243,
        AUTHOR = "Thirusittampalam, K. and Hossain, M.J. and Ghita, O. and Whelan, P.F.",
        TITLE = "Cellular Tracking in Time-Lapse Phase Contrast Images",
        BOOKTITLE = IMVIP09,
        YEAR = "2009",
        PAGES = "77-82",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249131"}

@inproceedings{bb254244,
        AUTHOR = "Mohamed, R. and El Baz, A. and Navalta, J.",
        TITLE = "Assessment of exercise-induced immune cell apoptosis using
morphological image processing",
        BOOKTITLE = ICIP09,
        YEAR = "2009",
        PAGES = "2649-2652",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249132"}

@inproceedings{bb254245,
        AUTHOR = "Quelhas, P. and Mendonca, A.M. and Campilho, A.",
        TITLE = "Optical Flow Based Arabidopsis Thaliana Root Meristem Cell Division
Detection",
        BOOKTITLE = ICIAR10,
        YEAR = "2010",
        PAGES = "II: 217-226",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249133"}

@inproceedings{bb254246,
        AUTHOR = "Marcuzzo, M. and Guichard, T. and Quelhas, P. and Mendonca, A.M. and Campilho, A.",
        TITLE = "Cell Division Detection on the Arabidopsis Thaliana Root",
        BOOKTITLE = IbPRIA09,
        YEAR = "2009",
        PAGES = "168-175",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249134"}

@inproceedings{bb254247,
        AUTHOR = "Marcuzzo, M. and Quelhas, P. and Campilho, A. and Mendonca, A.M. and Campilho, A.",
        TITLE = "A Hybrid Approach for Arabidopsis Root Cell Image Segmentation",
        BOOKTITLE = ICIAR08,
        YEAR = "2008",
        PAGES = "xx-yy",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249135"}

@inproceedings{bb254248,
        AUTHOR = "Marcuzzo, M. and Quelhas, P. and Mendonca, A.M. and Campilho, A.",
        TITLE = "Tracking of Arabidopsis thaliana root cells in time-lapse microscopy",
        BOOKTITLE = ICPR08,
        YEAR = "2008",
        PAGES = "1-4",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249136"}

@inproceedings{bb254249,
        AUTHOR = "Sanchez, L. and Gonzalez, V. and Alegre, E. and Alaiz, R.",
        TITLE = "Classification and Quantification Based on Image Analysis for Sperm
Samples with Uncertain Damaged/Intact Cell Proportions",
        BOOKTITLE = ICIAR08,
        YEAR = "2008",
        PAGES = "xx-yy",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249137"}

@inproceedings{bb254250,
        AUTHOR = "Garcia, B. and Campilho, A. and Scheres, B. and Campilho, A.",
        TITLE = "Automatic Tracking of Arabidopsis thaliana Root Meristem in Confocal
Microscopy",
        BOOKTITLE = ICIAR04,
        YEAR = "2004",
        PAGES = "II: 166-174",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249138"}

@inproceedings{bb254251,
        AUTHOR = "Nguyen, N. and Keller, S. and Huynh, T. and Shin, M.",
        TITLE = "Tracking colliding cells",
        BOOKTITLE = WACV09,
        YEAR = "2009",
        PAGES = "1-7",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249139"}

@inproceedings{bb254252,
        AUTHOR = "Russell, C. and Metaxas, D.N. and Restif, C. and Torr, P.H.S.",
        TITLE = "Using the Pn Potts model with learning methods to segment live cell
images",
        BOOKTITLE = MMBIA07,
        YEAR = "2007",
        PAGES = "1-8",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249140"}

@inproceedings{bb254253,
        AUTHOR = "Nath, S.K. and Bunyak, F. and Palaniappan, K.",
        TITLE = "Robust Tracking of Migrating Cells Using Four-Color Level Set
Segmentation",
        BOOKTITLE = ACIVS06,
        YEAR = "2006",
        PAGES = "920-932",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249141"}

@inproceedings{bb254254,
        AUTHOR = "Li, K. and Miller, E.D. and Weiss, L.E. and Campbell, P.G. and Kanade, T.",
        TITLE = "Online Tracking of Migrating and Proliferating Cells Imaged with
Phase-Contrast Microscopy",
        BOOKTITLE = MMBIA06,
        YEAR = "2006",
        PAGES = "65",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249142"}

@inproceedings{bb254255,
        AUTHOR = "Yang, G. and Matov, A. and Danuser, G.",
        TITLE = "Reliable Tracking of Large Scale Dense Antiparallel Particle Motion for
Fluorescence Live Cell Imaging",
        BOOKTITLE = "BioInfo05",
        YEAR = "2005",
        PAGES = "III: 138-138",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249143"}

@inproceedings{bb254256,
        AUTHOR = "Kanade, T. and Li, K.",
        TITLE = "Tracking of Migrating and Proliferating Cells in Phase-Contrast
Microscopy Imagery for Tissue Engineering",
        BOOKTITLE = CVBIA05,
        YEAR = "2005",
        PAGES = "24-24",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249144"}

@inproceedings{bb254257,
        AUTHOR = "Ray, N. and Dong, G. and Acton, S.T.",
        TITLE = "Tracking Multiple Cells by Correspondence Resolution in a Sequential
Bayesian Framework",
        BOOKTITLE = ICIP05,
        YEAR = "2005",
        PAGES = "I: 705-708",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249145"}

@article{bb254258,
        AUTHOR = "Berkes, P. and Wiskott, L.",
        TITLE = "Applying slow feature analysis to image sequences yields
a rich repertoire of complex cell properties",
        JOURNAL = "ICANN02",
        PAGES = "81-86",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249146"}

@inproceedings{bb254259,
        AUTHOR = "McNally, J.G.",
        TITLE = "Computational optical-sectioning microscopy for 3D quantification of
cell motion: results and challenges",
        BOOKTITLE = ICIP94,
        YEAR = "1994",
        PAGES = "III: 528-532",
        BIBSOURCE = "http://www.visionbib.com/bibliography/medical851trk1.html#TT249147"}

@article{bb254260,
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Application to Imaging 3-D Neural Ultrastructure With Electron
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@inproceedings{bb254274,
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Logical framework and fast implementation",
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