21.1.5 Super Resolution in Microscope Image Analysis

Chapter Contents (Back)
Microscope. Super Resolution.

de Juana, D.M.[Daniel M.], Oti, J.E.[Jose E.], Canales, V.F.[Vidal F.], Cagigal, M.P.[Manuel P.],
Transverse or axial superresolution in a 4Pi-confocal microscope by phase-only filters,
JOSA-A(20), No. 11, November 2003, pp. 2172-2178.
WWW Link. 0311
BibRef

Chu, K.Q.[Kai-Qin], Smith, Z.J.[Zachary J.], Wachsmann-Hogiu, S.[Sebastian], Lane, S.[Stephen],
Super-resolved spatial light interference microscopy,
JOSA-A(29), No. 3, March 2012, pp. 344-351.
WWW Link. 1203
BibRef

Passon, O.[Oliver], Grebe-Ellis, J.[Johannes],
Note on the classification of super-resolution in far-field microscopy and information theory,
JOSA-A(33), No. 7, July 2016, pp. B31-B35.
DOI Link 1608
Fourier optics and signal processing BibRef

Vigil, G.D.[Genevieve D.], Zhang, Y.[Yide], Khan, A.A.[Aamir A.], Howard, S.S.[Scott S.],
Description of deep saturated excitation multiphoton microscopy for super-resolution imaging,
JOSA-A(34), No. 7, July 2017, pp. 1217-1223.
DOI Link 1708
Superresolution, Fluorescence microscopy, , Nonlinear, optics BibRef

Negash, A.[Awoke], Labouesse, S.[Simon], Chaumet, P.C.[Patrick C.], Belkebir, K.[Kamal], Giovannini, H.[Hugues], Allain, M.[Marc], Idier, J.[Jerome], Sentenac, A.[Anne],
Two-photon speckle illumination for super-resolution microscopy,
JOSA-A(35), No. 6, June 2018, pp. 1028-1033.
DOI Link 1912
Speckle imaging, Fluorescence microscopy, Three-dimensional microscopy, Diffraction limit, Speckle patterns BibRef

Min, J., Jin, K.H., Unser, M., Ye, J.C.,
Grid-Free Localization Algorithm Using Low-Rank Hankel Matrix for Super-Resolution Microscopy,
IP(27), No. 10, October 2018, pp. 4771-4786.
IEEE DOI 1808
approximation theory, biology computing, cellular biophysics, fluorescence, Hankel matrices, image reconstruction, source localization BibRef

Solomon, O., Eldar, Y., Mutzafi, M., Segev, M.,
SPARCOM: Sparsity Based Super-resolution Correlation Microscopy,
SIIMS(12), No. 1, 2019, pp. 392-419.
DOI Link 1904
BibRef

Chen, L., Wang, M., Zhang, X., Zhang, M., Hu, Y., Shi, Z., Xi, P., Gao, J.,
Group-Sparsity-Based Super-Resolution Dipole Orientation Mapping,
MedImg(38), No. 11, November 2019, pp. 2687-2694.
IEEE DOI 1911
Image reconstruction, Microscopy, Optical imaging, Estimation, Modulation, Dipole orientation, fluorescence polarization, super-resolution BibRef

Ma, J.B.[Jia-Bo], Yu, J.Y.[Jing-Ya], Liu, S.B.[Si-Bo], Chen, L.[Li], Li, X.[Xu], Feng, J.[Jie], Chen, Z.X.[Zhi-Xing], Zeng, S.Q.[Shao-Qun], Liu, X.L.[Xiu-Li], Cheng, S.H.[Sheng-Hua],
PathSRGAN: Multi-Supervised Super-Resolution for Cytopathological Images Using Generative Adversarial Network,
MedImg(39), No. 9, September 2020, pp. 2920-2930.
IEEE DOI 2009
Generators, Image reconstruction, Cervical cancer, Microscopy, Cervical cancer, cytopathological images, super resolution BibRef

Szczotka, A.B.[Agnieszka Barbara], Shakir, D.I.[Dzhoshkun Ismail], Clarkson, M.J.[Matthew J.], Pereira, S.P.[Stephen P.], Vercauteren, T.[Tom],
Zero-Shot Super-Resolution With a Physically-Motivated Downsampling Kernel for Endomicroscopy,
MedImg(40), No. 7, July 2021, pp. 1863-1874.
IEEE DOI 2107
Kernel, Training, Image quality, Image reconstruction, Endomicroscopy, Superresolution, Pipelines, Blind super-resolution, zero-shot BibRef

Ma, J.[Jiabo], Liu, S.[Sibo], Cheng, S.H.[Sheng-Hua], Chen, R.X.[Rui-Xi], Liu, X.L.[Xiu-Li], Chen, L.[Li], Zeng, S.Q.[Shao-Qun],
STSRNet: Self-Texture Transfer Super-Resolution and Refocusing Network,
MedImg(41), No. 2, February 2022, pp. 383-393.
IEEE DOI 2202
Feature extraction, Image reconstruction, Microscopy, Superresolution, Fuses, Biomedical imaging, Super resolution, cytology BibRef

Choudhury, P.[Pranjal], Boruah, B.R.[Bosanta Ranjan],
Localization and Image Reconstruction in a STORM Based Super-resolution Microscope,
IPOL(14), 2024, pp. 64-85.
DOI Link 2403
BibRef

Ghanekar, B.[Bhargav], Saragadam, V.[Vishwanath], Mehra, D.[Dushyant], Gustavsson, A.K.[Anna-Karin], Sankaranarayanan, A.C.[Aswin C.], Veeraraghavan, A.[Ashok],
PS^2F: Polarized Spiral Point Spread Function for Single-Shot 3D Sensing,
PAMI(47), No. 8, August 2025, pp. 6134-6145.
IEEE DOI 2507
Imaging, Estimation, Microscopy, Location awareness, Lenses, Superresolution, Computational photography, 3D sensing, microscopy, polarization-encoded PSFs BibRef

Huo, Y.[Yue], Deng, Z.[Zhi], Zhang, P.[Peng], Lu, Z.X.[Zi-Xuan], Zhang, F.[Feifan], Li, M.[Meiqi], Hou, Y.W.[Yi-Wei], Xi, P.[Peng], Huang, W.[Wei], Zhang, Y.N.[Yan-Ning],
DMF-SIM: Dual-Model Framework for super-resolution reconstruction and denoising in Structured Illumination Microscopy,
PR(169), 2026, pp. 111865.
Elsevier DOI 2509
Structured illumination microscopy, Super-resolution, Image reconstruction, Denoising, Vision transformer, Channel attention BibRef


Li, Z.L.[Ze-Lin], Wang, C.W.[Chen-Wei], Huang, Z.[Zhaoke], Ma, Y.M.[Yi-Ming], Zhao, C.[Cunming], Zhao, Z.Y.[Zhong-Ying], Yan, H.[Hong],
Volume Tells: Dual Cycle-Consistent Diffusion for 3D Fluorescence Microscopy De-noising and Super-Resolution,
CVPR25(16091-16100)
IEEE DOI 2508
Training, Solid modeling, Microscopy, Noise reduction, Superresolution, Power lasers, Fluorescence, Spatial resolution, time-lapse 3d BibRef

Salmon, B.[Benjamin], Krull, A.[Alexander],
Unsupervised Denoising for Signal-Dependent and Row-Correlated Imaging Noise,
WACV25(2379-2389)
IEEE DOI 2505
Correlation, Microscopy, Noise, Noise reduction, Data models, Decoding, Image restoration, Reliability, Noise measurement, denoising, microscopy BibRef

Matsumoto, R.[Ren], Okabe, T.[Takahiro], Kawahara, R.[Ryo],
Polarization as Texture: Microscale 3D Shape from Polarized Light Focus,
WACV25(515-524)
IEEE DOI 2505
Reflectivity, Surface reconstruction, Shape, Microscopy, Noise reduction, Surface roughness, Vectors, Surface texture, polarization BibRef

Osuna-Vargas, P.[Pamela], Wehrheim, M.H.[Maren H.], Zinz, L.[Lucas], Rahm, J.[Johanna], Balakrishnan, A.[Ashwin], Kaminer, A.[Alexandra], Heilemann, M.[Mike], Kaschube, M.[Matthias],
Denoising Diffusion Models for High-Resolution Microscopy Image Restoration,
WACV25(4320-4330)
IEEE DOI Code:
DOI Link 2505
Training, Image resolution, Microscopy, Noise reduction, Stochastic processes, Diffusion models, Probabilistic logic, denoising diffusion probabilistic models BibRef

Ashesh, A.[Ashesh], Jug, F.[Florian],
denoisplit: A Method for Joint Microscopy Image Splitting and Unsupervised Denoising,
ECCV24(XXIV: 222-237).
Springer DOI 2412
BibRef

Möller, B.[Björn], Li, Z.Y.[Zheng-Yang], Etzkorn, M.[Markus], Fingscheidt, T.[Tim],
Low-Resolution-Only Microscopy Super-Resolution Models Generalizing to Non-Periodicities at Atomic Scale,
CVMI24(6936-6945)
IEEE DOI 2410
Training, Scanning electron microscopy, Transmission electron microscopy, Microscopy, Pipelines, image augmentation BibRef

Jiang, C.[Cheng], Gedeon, A.[Alexander], Lyu, Y.W.[Yi-Wei], Landgraf, E.[Eric], Zhang, Y.F.[Yu-Feng], Hou, X.H.[Xin-Hai], Kondepudi, A.[Akhil], Chowdury, A.[Asadur], Lee, H.L.[Hong-Lak], Hollon, T.[Todd],
Super-resolution of biomedical volumes with 2D supervision,
CVMI24(6966-6977)
IEEE DOI 2410
Measurement, Accuracy, Microscopy, Biological system modeling, Computational modeling, Superresolution BibRef

Aiyetigbo, M.[Mary], Korte, A.[Alexander], Anderson, E.[Ethan], Chalhoub, R.[Reda], Kalivas, P.[Peter], Luo, F.[Feng], Li, N.[Nianyi],
Unsupervised Microscopy Video Denoising,
CVMI24(6874-6883)
IEEE DOI Code:
WWW Link. 2410
Interpolation, Microscopy, Noise reduction, Noise, Medical services, Recording, Unsupervised, Video Denoising, Microscopy BibRef

Wang, J.[Jiahe], Han, B.[Boran],
Defocus Deblur Microscopy via Head-to-Tail Cross-Scale Fusion,
ICIP22(2081-2086)
IEEE DOI 2211
Representation learning, Deconvolution, Microscopy, Biology, Decoding, Microscopic Imaging, Defocus Deblurring, Deep learning, Multi-scale Feature BibRef

Chen, K.C.J.[Kuan-Chieh Jackie], Yang, G.[Ge], Kovacevic, J.[Jelena],
Spatial density estimation based segmentation of super-resolution localization microscopy images,
ICIP14(867-871)
IEEE DOI 1502
Estimation BibRef

Ishaq, O.[Omer], Elf, J.[Johan], Wahlby, C.[Carolina],
An Evaluation of the Faster STORM Method for Super-resolution Microscopy,
ICPR14(4435-4440)
IEEE DOI 1412
Microscopy BibRef

Chapter on Medical Applications, CAT, MRI, Ultrasound, Heart Models, Brain Models continues in
Ptychographic, Fourier Ptychographic, Ptycho-Tomography .


Last update:Oct 6, 2025 at 14:07:43