20.7.3.7.11 Plankton Analysis, Extraction, Features, Small Scale and Large Scale

Chapter Contents (Back)
Plankton. Application, Plankton.
See also Diatoms.
See also Algal Blooms, Analysis, Detection.
See also Water Quality, Turbidity, Water Areas.

Tang, X.[Xiaoou], Stewart, W.K.[W. Kenneth], Huang, H.[He], Gallager, S.M.[Scott M.], Davis, C.S.[Cabell S.], Vincent, L.[Luc], Marra, M.[Marty],
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Applied to detection and monitoring of plankton. BibRef

Toth, L., Culverhouse, P.F.,
3D Object Recognition from Static 2D Views Using Multiple Coarse Data Channels,
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Elsevier DOI A computer vision journal report on work dealing with monitoring plankton. BibRef 9909

d'Alimonte, D., Zibordi, G.,
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Luo, T., Kramer, K., Goldgof, D.B., Hall, L.O., Samson, S., Remsen, A., Hopkins, T.,
Recognizing Plankton Images From the Shadow Image Particle Profiling Evaluation Recorder,
SMC-B(34), No. 4, August 2004, pp. 1753-1762.
IEEE Abstract. 0409
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And: Errata: SMC-B(34), No. 6, December 2004, pp. 2423-2423.
IEEE Abstract. 0412
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Verikas, A.[Antanas], Gelzinis, A.[Adas], Bacauskiene, M.[Marija], Olenina, I., Olenin, S., Vaiciukynas, E.[Evaldas],
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Gelzinis, A.[Adas], Verikas, A.[Antanas], Vaiciukynas, E.[Evaldas], Bacauskiene, M.[Marija],
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Rousseaux, C.S.[Cecile S.], Gregg, W.W.[Watson W.],
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Ryan, J.P.[John P.], Davis, C.O.[Curtiss O.], Tufillaro, N.B.[Nicholas B.], Kudela, R.M.[Raphael M.], Gao, B.C.[Bo-Cai],
Application of the Hyperspectral Imager for the Coastal Ocean to Phytoplankton Ecology Studies in Monterey Bay, CA, USA,
RS(6), No. 2, 2014, pp. 1007-1025.
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See also Correction: Application of the Hyperspectral Imager for the Coastal Ocean to Phytoplankton Ecology Studies in Monterey Bay, CA, USA. BibRef

Montes, M.J.[Marcos J.], Ryan, J.P.[John P.], Davis, C.O.[Curtiss O.], Tufillaro, N.B.[Nicholas B.], Kudela, R.M.[Raphael M.],
Correction: Application of the Hyperspectral Imager for the Coastal Ocean to Phytoplankton Ecology Studies in Monterey Bay, CA, USA,
RS(7), No. 10, 2015, pp. 13364.
DOI Link 1511

See also Application of the Hyperspectral Imager for the Coastal Ocean to Phytoplankton Ecology Studies in Monterey Bay, CA, USA. BibRef

Siswanto, E.[Eko], Tanaka, K.[Katsuhisa],
Phytoplankton Biomass Dynamics in the Strait of Malacca within the Period of the SeaWiFS Full Mission: Seasonal Cycles, Interannual Variations and Decadal-Scale Trends,
RS(6), No. 4, 2014, pp. 2718-2742.
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Blondeau-Patissier, D.[David], Schroeder, T.[Thomas], Brando, V.E.[Vittorio E.], Maier, S.W.[Stefan W.], Dekker, A.G.[Arnold G.], Phinn, S.[Stuart],
ESA-MERIS 10-Year Mission Reveals Contrasting Phytoplankton Bloom Dynamics in Two Tropical Regions of Northern Australia,
RS(6), No. 4, 2014, pp. 2963-2988.
DOI Link 1405
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Brewin, R.J.W.[Robert J.W.], Mélin, F.[Frédéric], Sathyendranath, S.[Shubha], Steinmetz, F.[François], Chuprin, A.[Andrei], Grant, M.[Mike],
On the temporal consistency of chlorophyll products derived from three ocean-colour sensors,
PandRS(97), No. 1, 2014, pp. 171-184.
Elsevier DOI 1410
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Xi, H.Y.[Hong-Yan], Hieronymi, M.[Martin], Röttgers, R.[Rüdiger], Krasemann, H.[Hajo], Qiu, Z.F.[Zhong-Feng],
Hyperspectral Differentiation of Phytoplankton Taxonomic Groups: A Comparison between Using Remote Sensing Reflectance and Absorption Spectra,
RS(7), No. 11, 2015, pp. 14781.
DOI Link 1512
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Xue, K.[Kun], Zhang, Y.C.[Yu-Chao], Duan, H.T.[Hong-Tao], Ma, R.H.[Rong-Hua], Loiselle, S.[Steven], Zhang, M.W.[Min-Wei],
A Remote Sensing Approach to Estimate Vertical Profile Classes of Phytoplankton in a Eutrophic Lake,
RS(7), No. 11, 2015, pp. 14403.
DOI Link 1512
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Cristina, S.[Sónia], Cordeiro, C.[Clara], Lavender, S.[Samantha], Goela, P.C.[Priscila Costa], Icely, J.[John], Newton, A.[Alice],
MERIS Phytoplankton Time Series Products from the SW Iberian Peninsula (Sagres) Using Seasonal-Trend Decomposition Based on Loess,
RS(8), No. 6, 2016, pp. 449.
DOI Link 1608
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Wolanin, A.[Aleksandra], Soppa, M.A.[Mariana A.], Bracher, A.[Astrid],
Investigation of Spectral Band Requirements for Improving Retrievals of Phytoplankton Functional Types,
RS(8), No. 10, 2016, pp. 871.
DOI Link 1609
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Liu, Z.H.[Zong-Hua], Watson, J.[John], Allen, A.[Alastair],
A polygonal approximation of shape boundaries of marine plankton based-on genetic algorithms,
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Elsevier DOI 1612
Image processing BibRef

Zheng, H.Y.[Hai-Yong], Wang, N.[Nan], Yu, Z.B.[Zhi-Bin], Gu, Z.R.[Zhao-Rui], Zheng, B.[Bing],
Robust and automatic cell detection and segmentation from microscopic images of non-setae phytoplankton species,
IET-IPR(11), No. 11, November 2017, pp. 1077-1085.
DOI Link 1711
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Waga, H.[Hisatomo], Hirawake, T.[Toru], Fujiwara, A.[Amane], Kikuchi, T.[Takashi], Nishino, S.[Shigeto], Suzuki, K.[Koji], Takao, S.[Shintaro], Saitoh, S.I.[Sei-Ichi],
Differences in Rate and Direction of Shifts between Phytoplankton Size Structure and Sea Surface Temperature,
RS(9), No. 3, 2017, pp. xx-yy.
DOI Link 1704
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Deng, Y.B.[Yu-Bing], Zhang, Y.L.[Yun-Lin], Li, D.[Deping], Shi, K.[Kun], Zhang, Y.[Yibo],
Temporal and Spatial Dynamics of Phytoplankton Primary Production in Lake Taihu Derived from MODIS Data,
RS(9), No. 3, 2017, pp. xx-yy.
DOI Link 1704
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Hu, S.B.[Shui-Bo], Liu, H.Z.[Hui-Zeng], Zhao, W.J.[Wen-Jing], Shi, T.Z.[Tie-Zhu], Hu, Z.W.[Zhong-Wen], Li, Q.Q.[Qing-Quan], Wu, G.F.[Guo-Feng],
Comparison of Machine Learning Techniques in Inferring Phytoplankton Size Classes,
RS(10), No. 3, 2018, pp. xx-yy.
DOI Link 1804
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Pan, J.[Jiayi], Huang, L.[Lei], Devlin, A.T.[Adam T.], Lin, H.[Hui],
Quantification of Typhoon-Induced Phytoplankton Blooms Using Satellite Multi-Sensor Data,
RS(10), No. 2, 2018, pp. xx-yy.
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Martinez, E.[Elodie], Raapoto, H.[Hirohiti], Maes, C.[Christophe], Maamaatuaihutapu, K.[Keitapu],
Influence of Tropical Instability Waves on Phytoplankton Biomass near the Marquesas Islands,
RS(10), No. 4, 2018, pp. xx-yy.
DOI Link 1805
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Hu, S.B.[Shui-Bo], Zhou, W.[Wen], Wang, G.F.[Gui-Fen], Cao, W.X.[Wen-Xi], Xu, Z.T.[Zhan-Tang], Liu, H.Z.[Hui-Zeng], Wu, G.F.[Guo-Feng], Zhao, W.J.[Wen-Jing],
Comparison of Satellite-Derived Phytoplankton Size Classes Using In-Situ Measurements in the South China Sea,
RS(10), No. 4, 2018, pp. xx-yy.
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Correa-Ramirez, M.[Marco], Morales, C.E.[Carmen E.], Letelier, R.[Ricardo], Anabalón, V.[Valeria], Hormazabal, S.[Samuel],
Improving the Remote Sensing Retrieval of Phytoplankton Functional Types (PFT) Using Empirical Orthogonal Functions: A Case Study in a Coastal Upwelling Region,
RS(10), No. 4, 2018, pp. xx-yy.
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Li, W.Z.[Wen-Zhao], El-Askary, H.[Hesham], Qurban, M.A.[Mohamed A.], Proestakis, E.[Emmanouil], Garay, M.J.[Michael J.], Kalashnikova, O.V.[Olga V.], Amiridis, V.[Vassilis], Gkikas, A.[Antonis], Marinou, E.[Eleni], Piechota, T.[Thomas], Manikandan, K.P.,
An Assessment of Atmospheric and Meteorological Factors Regulating Red Sea Phytoplankton Growth,
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Joo, H.[Huitae], Lee, D.[Dabin], Son, S.H.[Seung Hyun], Lee, S.H.[Sang Heon],
Annual New Production of Phytoplankton Estimated from MODIS-Derived Nitrate Concentration in the East/Japan Sea,
RS(10), No. 5, 2018, pp. xx-yy.
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Launeau, P.[Patrick], Méléder, V.[Vona], Verpoorter, C.[Charles], Barillé, L.[Laurent], Kazemipour-Ricci, F.[Farzaneh], Giraud, M.[Manuel], Jesus, B.[Bruno], Le Menn, E.[Erwan],
Microphytobenthos Biomass and Diversity Mapping at Different Spatial Scales with a Hyperspectral Optical Model,
RS(10), No. 5, 2018, pp. xx-yy.
DOI Link 1806
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Mascarenhas, V.J.[Veloisa J.], Zielinski, O.[Oliver],
Parameterization of Spectral Particulate and Phytoplankton Absorption Coefficients in Sognefjord and Trondheimsfjord, Two Contrasting Norwegian Fjord Ecosystems,
RS(10), No. 6, 2018, pp. xx-yy.
DOI Link 1806
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Corredor-Acosta, A.[Andrea], Morales, C.E.[Carmen E.], Brewin, R.J.W.[Robert J. W.], Auger, P.A.[Pierre-Amaël], Pizarro, O.[Oscar], Hormazabal, S.[Samuel], Anabalón, V.[Valeria],
Phytoplankton Size Structure in Association with Mesoscale Eddies off Central-Southern Chile: The Satellite Application of a Phytoplankton Size-Class Model,
RS(10), No. 6, 2018, pp. xx-yy.
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Lange, P.K.[Priscila K.], Brewin, R.J.W.[Robert J. W.], Dall'Olmo, G.[Giorgio], Tarran, G.A.[Glen A.], Sathyendranath, S.[Shubha], Zubkov, M.[Mikhail], Bouman, H.A.[Heather A.],
Scratching Beneath the Surface: A Model to Predict the Vertical Distribution of Prochlorococcus Using Remote Sensing,
RS(10), No. 6, 2018, pp. xx-yy.
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unicellular cyanobacterium Prochlorococcus is the most dominant resident of the subtropical gyres. BibRef

Liu, X.[Xiaohan], Devred, E.[Emmanuel], Johnson, C.[Catherine],
Remote Sensing of Phytoplankton Size Class in Northwest Atlantic from 1998 to 2016: Bio-Optical Algorithms Comparison and Application,
RS(10), No. 7, 2018, pp. xx-yy.
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Lamont, T.[Tarron], Barlow, R.G.[Raymond G.], Brewin, R.J.W.[Robert J. W.],
Variations in Remotely-Sensed Phytoplankton Size Structure of a Cyclonic Eddy in the Southwest Indian Ocean,
RS(10), No. 7, 2018, pp. xx-yy.
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Raitoharju, J.[Jenni], Riabchenko, E.[Ekaterina], Ahmad, I.[Iftikhar], Iosifidis, A.[Alexandros], Gabbouj, M.[Moncef], Kiranyaz, S.[Serkan], Tirronen, V.[Ville], Ärje, J.[Johanna], Kärkkäinen, S.[Salme], Meissner, K.[Kristian],
Benchmark database for fine-grained image classification of benthic macroinvertebrates,
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Elsevier DOI 1809
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Biomonitoring, Fine-grained classification, Benthic macroinvertebrates, Deep learning, Convolutional Neural Networks. Databases, Ecosystems, Feature extraction, Machine vision, Microscopy, Water, resources BibRef

Raitoharju, J.[Jenni], Riabchenko, E.[Ekaterina], Meissner, K., Ahmad, I.[Iftikhar], Iosifidis, A.[Alexandros], Gabbouj, M.[Moncef], Kiranyaz, S.[Serkan],
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Kiranyaz, S.[Serkan], Gabbouj, M.[Moncef], Pulkkinen, J.[Jenni], Ince, T.[Turker], Meissner, K.[Kristian],
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Zhai, P.W.[Peng-Wang], Boss, E.[Emmanuel], Franz, B.[Bryan], Werdell, P.J.[P. Jeremy], Hu, Y.X.[Yong-Xiang],
Radiative Transfer Modeling of Phytoplankton Fluorescence Quenching Processes,
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Al-Barazanchi, H.[Hussein], Verma, A.[Abhishek], Wang, S.X.[Shawn X.],
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Sammartino, M.[Michela], Marullo, S.[Salvatore], Santoleri, R.[Rosalia], Scardi, M.[Michele],
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Xue, K.[Kun], Ma, R.H.[Rong-Hua], Wang, D.[Dian], Shen, M.[Ming],
Optical Classification of the Remote Sensing Reflectance and Its Application in Deriving the Specific Phytoplankton Absorption in Optically Complex Lakes,
RS(11), No. 2, 2019, pp. xx-yy.
DOI Link 1902
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Houskeeper, H.F.[Henry F.], Kudela, R.M.[Raphael M.],
Ocean Color Quality Control Masks Contain the High Phytoplankton Fraction of Coastal Ocean Observations,
RS(11), No. 18, 2019, pp. xx-yy.
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Bellacicco, M.[Marco], Pitarch, J.[Jaime], Organelli, E.[Emanuele], Martinez-Vicente, V.[Victor], Volpe, G.[Gianluca], Marullo, S.[Salvatore],
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Liu, Y.Y.[Yang-Yang], Boss, E.[Emmanuel], Chase, A.[Alison], Xi, H.Y.[Hong-Yan], Zhang, X.D.[Xiao-Dong], Röttgers, R.[Rüdiger], Pan, Y.[Yanqun], Bracher, A.[Astrid],
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Deng, L.[Lin], Zhou, W.[Wen], Cao, W.X.[Wen-Xi], Zheng, W.[Wendi], Wang, G.F.[Gui-Fen], Xu, Z.T.[Zhan-Tang], Li, C.[Cai], Yang, Y.Z.[Yue-Zhong], Hu, S.B.[Shui-Bo], Zhao, W.J.[Wen-Jing],
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Soriano-González, J.[Jesús], Angelats, E.[Eduard], Fernández-Tejedor, M.[Margarita], Diogene, J.[Jorge], Alcaraz, C.[Carles],
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Ogashawara, I.[Igor], Li, L.[Lin],
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Mishra, D.R.[Deepak R.], Kumar, A.[Abhishek], Muduli, P.R.[Pradipta R.], Equeenuddin, S.M., Rastogi, G.[Gurdeep], Acharyya, T.[Tamoghna], Swain, D.[Debadatta],
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Cassianides, A.[Angelina], Martinez, E.[Elodie], Maes, C.[Christophe], Carton, X.[Xavier], Gorgues, T.[Thomas],
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Chapter on Implementations and Applications, Databases, QBIC, Video Analysis, Hardware and Software, Inspection continues in
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