20.4.1 Chromosome Analysis and Extraction, Genome

Chapter Contents (Back)
Chromosomes. Genome Analysis. Many of the earlier papers. See also Cell Nucleus, Cell Nuclei Analysis, Detection.

Paton, K.,
Conic sections in chromosome analysis,
PR(2), No. 1, January 1970, pp. 39-40.
WWW Link. 0309
BibRef

Lee, E.T.,
The shape-oriented dissimilarity of polygons and its application to the classification of chromosome images,
PR(6), No. 1, June 1974, pp. 47-60.
WWW Link. 0309
BibRef

Vanderheydt, L., Oosterlinck, A., van Daele, J., van den Berghe, H.,
Design of a graph-representation and a fuzzy-classifier for human chromosomes,
PR(12), No. 3, 1980, pp. 201-210.
WWW Link. 0309
BibRef

Vanderheydt, L., Dom, F., Oosterlinck, A., van den Berghe, H.,
Two-dimensional shape decomposition using fuzzy subset theory applied to automated chromosome analysis,
PR(13), No. 2, 1981, pp. 147-157.
WWW Link. 0309
BibRef

Nickolls, P., Piper, J., Rutovitz, D., Chisholm, A., Johnstone, I., Robertson, M.,
Pre-processing of images in an automated chromosome analysis system,
PR(14), No. 1-6, 1981, pp. 219-229.
WWW Link. 0309
BibRef

Lundsteen, C.[Claes], Gerdes, T.[Tommy], Philip, K.[Kim],
A model for selection of attributes for automatic pattern recognition. Stepwise data compression monitored by visual classification,
PR(15), No. 3, 1982, pp. 243-251.
WWW Link. 0309
Based on a pattern recognition study of human chromosomes a model is proposed for selection of attributes for automatic pattern recognition. BibRef

Harms, H., Gunzer, U., Aus, H.M.,
Combined Local Color and Texture Analysis of Stained Cells,
CVGIP(33), No. 3, March 1986, pp. 364-376.
WWW Link. BibRef 8603

Gallus, G., Neurath, P.W.,
Improved Computer Chromosome Analysis Incorporating Preprocessing and Boundary Analysis,
Physics in Med. and Bio.(15), No. 3, 1970, p0p. 435-445. BibRef 7000

Klinger, A., Kochman, A., Alexandridis, N.A.,
Computer Analysis of Chromosome Patterns,
TC(20), No. 9, September 1971, ppp. 1014. BibRef 7109

Onoe, M., Takagi, M., Yukimatsu, K.,
Chromosome Analysis by Minicomputer,
CGIP(2), 1973, pp. 402-416. BibRef 7300

Granlund, G.H.[Goesta H.],
Statistical Analysis of Chromosome Characteristics,
PR(6), No. 2, October 1974, pp. 115-126.
WWW Link. BibRef 7410

Tso, M.K.S., Graham, J.,
The Transformation Algorithm as an Aid to Chromosome Classification,
PRL(1), 1983, pp. 489-496. BibRef 8300

Piper, J., Granum, E., Rutovitz, D., Ruttledge, H.,
Automation of Chromosome Analysis,
SP(2), 1980, pp. 203-221. BibRef 8000

Piper, J.,
Classification of Chromosomes Contrained by Expected Class Size,
PRL(4), 1986, pp. 391-395. BibRef 8600

Piper, J., Rutovitz, D.,
A Parallel Processor Implementation of a Chromosome Analysis System,
PRL(4), 1986, pp. 397-404. BibRef 8600

Ji, L.[Liang],
Intelligent splitting in the chromosome domain,
PR(22), No. 5, 1989, pp. 519-532.
WWW Link. 0309
BibRef

He, L.[Liang], Chai, Z.M.[Zhen-Ming],
A new method of automatic SCE detection,
PR(23), No. 1-2, 1990, pp. 95-97.
WWW Link. 0401
sister chromatid exchange. BibRef

Turner, M., Austin, J., Allinson, N.M., Thompson, P.,
Chromosome location and feature extraction using neural networks,
IVC(11), No. 4, May 1993, pp. 235-239.
WWW Link. 0401
BibRef

Lerner, B., Guterman, H., Dinstein, I., Romem, Y.,
Medial Axis Transform-Based Features and a Neural-Network for Human-Chromosome Classification,
PR(28), No. 11, November 1995, pp. 1673-1683.
WWW Link. Medial Axis Transform. BibRef 9511

Dougherty, E.R.[Edward R.], Chen, Y.D.[Yi-Dong], Waks, A.[Amir],
Bayesian Morphological Peak Estimation and Its Application to Chromosome Counting Via Fluorescence in-Situ Hybridization,
PR(29), No. 6, June 1996, pp. 987-996.
WWW Link. 9606
BibRef

Ritter, G.[Gunter], Gallegos, M.T.[María Teresa], Gaggermeier, K.[Karl],
Automatic context-sensitive karyotyping of human chromosomes based on elliptically symmetric statistical distributions,
PR(28), No. 6, June 1995, pp. 823-831.
WWW Link. 0401
BibRef

Ritter, G.[Gunter], Gallegos, M.T.[María Teresa],
Outliers in Statistical Pattern Recognition and an Application to Automatic Chromosome Classification,
PRL(18), No. 6, June 1997, pp. 525-539. 9710
BibRef

Agam, G., Dinstein, I.,
Geometric Separation of Partially Overlapping Nonrigid Objects Applied to Automatic Chromosome Classification,
PAMI(19), No. 11, November 1997, pp. 1212-1222.
IEEE DOI 9712
Merge the separation problem and recognition problem. BibRef

Stanley, R.J.[Ronald J.], Keller, J.M.[James M.], Gader, P.D.[Paul D.], Caldwell, C.W.[Charles W.],
Homologue Matching Applications: Recognition of Overlapped Chromosomes,
PAA(1), No. 4 1998, pp. 206-217. BibRef 9800

Stanley, R.J., Keller, J.M., Gader, P.D., Caldwell, C.W.,
Data-Driven Homolog Matching for Chromosome Identification,
MedImg(17), No. 3, June 1998, pp. 451-462.
IEEE Top Reference. 9809
BibRef

Charters, G.C.[Graham C.], Graham, J.[Jim],
Trainable grey-level models for disentangling overlapping chromosomes,
PR(32), No. 8, August 1999, pp. 1335-1349.
WWW Link. BibRef 9908

Ritter, G.[Gunter], Gaggermeier, K.[Karl],
Automatic classification of chromosomes by means of quadratically asymmetric statistical distributions,
PR(32), No. 6, June 1999, pp. 997-1008.
WWW Link. BibRef 9906

Ritter, G.[Gunter], Schreib, G.[Gernot],
Using dominant points and variants for profile extraction from chromosomes,
PR(34), No. 4, April 2001, pp. 923-938.
WWW Link. 0101
BibRef
Earlier:
Profile and Feature Extraction from Chromosomes,
ICPR00(Vol II: 287-290).
IEEE DOI 0009
BibRef

Wang, Y.P.[Yu-Ping], Wu, Q.A.[Qi-Ang], Castleman, K.R., Xiong, Z.X.[Zi-Xiang],
Chromosome image enhancement using multiscale differential operators,
MedImg(22), No. 5, May 2003, pp. 685-693.
IEEE Abstract. 0307
BibRef

Wang, Y.P.,
Image Representations Using Multiscale Differential Operators,
IP(8), No. 12, December 1999, pp. 1757-1771.
IEEE DOI 9912
BibRef

Urdiales García, C.[Cristina], Bandera Rubio, A.[Antonio], Arrebola Pérez, F.[Fabián], Sandoval Hernández, F.[Francisco],
A curvature-based multiresolution automatic karyotyping system,
MVA(14), No. 3, July 2003, pp. 145-156.
Springer DOI 0308
BibRef

Cai, N.[Nian], Hu, K.H.[Kuang-Hu], Xiong, H.T.[Hai-Tao], Li, S.Y.[Shu-Yu], Su, W.F.[Wan-Fang], Zhu, F.S.[Feng-Sui],
Image segmentation of G bands of Triticum monococcum chromosomes based on the model-based neural network,
PRL(25), No. 3, February 2004, pp. 319-329.
WWW Link. 0401
BibRef

Bhandarkar, S.M.[Suchendra M.], Jiang, T.Z.[Tong-Zhang], Verma, K.[Kunal], Li, N.[Nan],
Automated analysis of DNA hybridization images for high-throughput genomics,
MVA(15), No. 3, July 2004, pp. 121-138.
Springer DOI 0407
BibRef
Earlier:
Image Analysis for High Throughput Genomics,
ICIP01(II: 285-288).
IEEE DOI 0108
BibRef

Bhandarkar, S.M.[Suchendra M.], Jiang, T.Z.[Tong-Zhang],
Automated Analysis of DNA Hybridization Images,
WACV00(126-131).
WWW Link. 0010
BibRef

Hengerer, A., Wunder, A., Wagenaar, D.J., Vija, A.H., Shah, M., Grimm, J.,
From Genomics to Clinical Molecular Imaging,
PIEEE(93), No. 4, April 2005, pp. 819-828.
IEEE DOI 0504
BibRef

Sampat, M.P., Bovik, A.C., Aggarwal, J.K., Castleman, K.R.,
Supervised parametric and non-parametric classification of chromosome images,
PR(38), No. 8, August 2005, pp. 1209-1223.
WWW Link. 0505
BibRef

Liu, J., Demirci, O., Calhoun, V.D.,
A Parallel Independent Component Analysis Approach to Investigate Genomic Influence on Brain Function,
SPLetters(15), No. 1, 2008, pp. 413-416.
IEEE DOI 0804
BibRef

Choi, H., Bovik, A.C., Castleman, K.R.,
Feature Normalization via Expectation Maximization and Unsupervised Nonparametric Classification For M-FISH Chromosome Images,
MedImg(27), No. 8, August 2008, pp. 1107-1119.
IEEE DOI 0808
BibRef

Choi, H., Castleman, K.R., Bovik, A.C.,
Color Compensation of Multicolor FISH Images,
MedImg(28), No. 1, January 2009, pp. 129-136.
IEEE DOI 0901
BibRef
Earlier:
Segmentation and Fuzzy-Logic Classification of M-FISH Chromosome Images,
ICIP06(69-72).
IEEE DOI 0610
BibRef

Wu, Q.A., Liu, Z., Chen, T., Xiong, Z.X., Castleman, K.R.,
Subspace-Based Prototyping and Classification of Chromosome Images,
IP(14), No. 9, September 2005, pp. 1277-1287.
IEEE DOI 0508
BibRef

Sage, D., Neumann, F.R., Hediger, F., Gasser, S.M., Unser, M.,
Automatic Tracking of Individual Fluorescence Particles: Application to the Study of Chromosome Dynamics,
IP(14), No. 9, September 2005, pp. 1372-1383.
IEEE DOI 0508
BibRef

Moradi, M.[Mehdi], Setarehdan, S.K.[S. Kamaledin],
New features for automatic classification of human chromosomes: A feasibility study,
PRL(27), No. 1, 1 January 2006, pp. 19-28.
WWW Link. 0512
BibRef

Schwartzkopf, W.C., Bovik, A.C., Evans, B.L.,
Maximum-likelihood techniques for joint segmentation-classification of multispectral chromosome images,
MedImg(24), No. 12, December 2005, pp. 1593-1610.
IEEE DOI 0601
BibRef

Kao, J.H.[Jau-Hong], Chuang, J.H.[Jen-Hui], Wang, T.P.[Tsai-Pei],
Chromosome classification based on the band profile similarity along approximate medial axis,
PR(41), No. 1, January 2008, pp. 77-89.
WWW Link. 0710
BibRef
Earlier:
Automatic Chromosome Classification Using Medial Axis Approximation and Band Profile Similarity,
ACCV06(II:274-283).
Springer DOI 0601
Chromosome classification; Medial axis; Sequence similarity; Sequence matching BibRef

Ritter, G.[Gunter], Gao, L.[Le],
Automatic segmentation of metaphase cells based on global context and variant analysis,
PR(41), No. 1, January 2008, pp. 38-55.
WWW Link. 0710
Automatic chromosome segmentation; Karyotyping; Shape analysis; Context; Variant analysis; Diagnostic classification BibRef

Bandyopadhyay, S., Maulik, U., Roy, D.,
Gene Identification: Classical and Computational Intelligence Approaches,
SMC-C(38), No. 1, January 2008, pp. 55-68.
IEEE DOI 0712
BibRef

Legrand, B.[Benoit], Chang, C.S., Ong, S.H., Neo, S.Y.[Soek-Ying], Palanisamy, N.[Nallasivam],
Chromosome classification using dynamic time warping,
PRL(29), No. 3, 1 February 2008, pp. 215-222.
WWW Link. 0801
Chromosome; Karyotype; Feature extraction; Classification; Dynamic time warping BibRef

Karvelis, P.S., Tzallas, A.T., Fotiadis, D.I., Georgiou, I.,
A Multichannel Watershed-Based Segmentation Method for Multispectral Chromosome Classification,
MedImg(27), No. 5, May 2008, pp. 697-708.
IEEE DOI 0711
BibRef

Roshtkhari, M.J.[Mehrsan Javan], Setarehdan, S.K.[Seyed Kamaledin],
A novel algorithm for straightening highly curved images of human chromosome,
PRL(29), No. 9, 1 July 2008, pp. 1208-1217.
WWW Link. 0711
Curved chromosomes; Chromosome classification; Projection vectors; Chromosome straightening BibRef

Shah, S.K.[Shishir K.],
Performance Modeling and Algorithm Characterization for Robust Image Segmentation: Robust Image Segmentation,
IJCV(80), No. 1, October 2008, pp. xx-yy.
Springer DOI 0809
BibRef
Earlier:
Segmenting Biological Particles in Multispectral Microscopy Images,
WACV07(44-44).
IEEE DOI 0702
BibRef
Earlier:
Multispectral Integration for Segmentation of Chromosome Images,
CAIP05(506).
Springer DOI 0509
BibRef

Legrand, B., Chang, C.S., Ong, S.H., Neo, S.Y., Palanisamy, N.,
Automated Identification of Chromosome Segments Involved in Translocations by Combining Spectral Karyotyping and Banding Analysis,
SMC-A(38), No. 6, November 2008, pp. 1381-1384.
IEEE DOI 0811
BibRef

Foret, S.[Sylvain], Wilson, S.R.[Susan R.], Burden, C.J.[Conrad J.],
Empirical distribution of k-word matches in biological sequences,
PR(42), No. 4, April 2009, pp. 539-548.
Elsevier DOI 0812
Alignment-free sequence comparison; Biological sequences; Genomic data BibRef

Volkovich, Z.[Zeev], Kirzhner, V.[Valery], Barzily, Z.[Zeev], Hosid, S.[Sergey], Korenblat, K.[Katerina],
A linguistic approach to classification of bacterial genomes,
PR(43), No. 3, March 2010, pp. 1083-1093.
Elsevier DOI 1001
Genome clustering; Cluster validation; Compositional spectra method BibRef

Gupta, N.[Neelima], Aggarwal, S.[Seema],
MIB: Using mutual information for biclustering gene expression data,
PR(43), No. 8, August 2010, pp. 2692-2697.
Elsevier DOI 1006
Biclustering; Gene expression data; Mutual information; GO term and transcription factor binding site BibRef

Liu, H.[Huawen], Liu, L.[Lei], Zhang, H.[Huijie],
Ensemble gene selection for cancer classification,
PR(43), No. 8, August 2010, pp. 2763-2772.
Elsevier DOI 1006
Gene selection; Ensemble learning; Cancer classification; Mutual information; Microarray data BibRef

Douzal-Chouakria, A.[Ahlame], Diallo, A.[Alpha], Giroud, F.[Francoise],
A random-periods model for the comparison of a metrics efficiency to classify cell-cycle expressed genes,
PRL(31), No. 12, 1 September 2010, pp. 1608-1617.
Elsevier DOI 1008
Time series; Distance; Clustering; Classification; Genes expression profiles BibRef

Karvelis, P.S.[Petros S.], Likas, A.[Aristidis], Fotiadis, D.I.[Dimitrios I.],
Identifying touching and overlapping chromosomes using the watershed transform and gradient paths,
PRL(31), No. 16, December 2010, pp. 2474-2488.
Elsevier DOI 1011
Chromosome classification; Watershed transform; Karyotyping; Multiplex Fluorescent In Situ Hybridization BibRef

Karvelis, P.S.[Petros S.], Fotiadis, D.I.[Dimitrios I.],
A region based decorrelation stretching method: Application to multispectral chromosome image classification,
ICIP08(1456-1459).
IEEE DOI 0810
BibRef

Paliwal, K.K.[Kuldip K.], Sharma, A.[Alok],
Improved direct LDA and its application to DNA microarray gene expression data,
PRL(31), No. 16, December 2010, pp. 2489-2492.
Elsevier DOI 1011
Direct linear discriminant analysis; Small sample size problem; Dimensionality reduction BibRef

Sikora, M.[Marek], Gruca, A.[Aleksandra],
Induction and selection of the most interesting Gene Ontology based multiattribute rules for descriptions of gene groups,
PRL(32), No. 2, 15 January 2011, pp. 258-269.
Elsevier DOI 1101
Decision rules; Rule interestingness measures; Gene Ontology; Gene groups descriptions; Rough sets BibRef

Shamaiah, M., Lee, S.H., Vikalo, H.,
Graphical Models and Inference on Graphs in Genomics: Challenges of high-throughput data analysis,
SPMag(29), No. 1, 2012, pp. 51-65.
IEEE DOI 1112
BibRef

Matos, L.M.O.[Luís M. O.], Pratas, D.[Diogo], Pinho, A.J.[Armando J.],
Compression of Whole Genome Alignments Using a Mixture of Finite-Context Models,
ICIAR12(I: 359-366).
Springer DOI 1206
BibRef

Zeng, N., Wang, Z., Zineddin, B., Li, Y., Du, M., Xiao, L., Liu, X., Young, T.,
Image-Based Quantitative Analysis of Gold Immunochromatographic Strip via Cellular Neural Network Approach,
MedImg(33), No. 5, May 2014, pp. 1129-1136.
IEEE DOI 1405
Algorithm design and analysis BibRef

Schwartz, G.W.[Gregory W.], Shokoufandeh, A.[Ali], Ontañón, S.[Santiago], Hershberg, U.[Uri],
Using a novel clumpiness measure to unite data with metadata: Finding common sequence patterns in immune receptor germline V genes,
PRL(74), No. 1, 2016, pp. 24-29.
Elsevier DOI 1604
Hierarchical clustering BibRef

Ulfarsson, M.O., Palsson, F., Sigurdsson, J., Sveinsson, J.R.,
Classification of Big Data With Application to Imaging Genetics,
PIEEE(104), No. 11, November 2016, pp. 2137-2154.
IEEE DOI 1609
Big Data BibRef


Sharma, M., Saha, O., Sriraman, A., Hebbalaguppe, R., Vig, L., Karande, S.,
Crowdsourcing for Chromosome Segmentation and Deep Classification,
Microscopy17(786-793)
IEEE DOI 1709
Biological cells, Crowdsourcing, Image segmentation, Machine learning, Microscopy, Pipelines BibRef

Pratas, D.[Diogo], Hosseini, M.[Morteza], Silva, R.M.[Raquel M.], Pinho, A.J.[Armando J.], Ferreira, P.J.S.G.[Paulo J.S.G.],
Visualization of Distinct DNA Regions of the Modern Human Relatively to a Neanderthal Genome,
IbPRIA17(235-242).
Springer DOI 1706
BibRef

Sahoo, P., Acharya, S., Saha, S.,
Automatic generation of biclusters from gene expression data using multi-objective simulated annealing approach,
ICPR16(2174-2179)
IEEE DOI 1705
Clustering algorithms, Computer science, Electronic mail, Gene expression, Linear programming, Simulated annealing, AMOSA, Biclustering, Gene expression data, Microarray technology, Multi-objective, optimization BibRef

Ardanza-Trevijano, S.[Sergio], Gonzalez, G.[Georgina], Borrman, T.[Tyler], Garcia, J.L.[Juan Luis], Arsuaga, J.[Javier],
Topological Analysis of Amplicon Structure in Comparative Genomic Hybridization (CGH) Data: An Application to ERBB2/HER2/NEU Amplified Tumors,
CTIC16(113-129).
Springer DOI 1608
BibRef

Adetiba, E.[Emmanuel], Olugbara, O.O.[Oludayo O.],
Classification of Eukaryotic Organisms Through Cepstral Analysis of Mitochondrial DNA,
ICISP16(243-252).
WWW Link. 1606
BibRef

Mandal, M., Maity, S., Mukhopadhyay, A.,
Partial rank aggregation using multiobjective genetic algorithm: Application in ranking genes,
ICAPR15(1-6)
IEEE DOI 1511
biology computing BibRef

Maji, P.[Pradipta], Shah, E.[Ekta], Paul, S.[Sushmita],
A New Similarity Measure for Identification of Disease Genes,
PReMI15(451-461).
Springer DOI 1511
BibRef

McCann, M.T.[Michael T.], Majumdar, J.[Joshita], Peng, C.[Cheng], Castro, C.A.[Carlos A.], Kovacevic, J.[Jelena],
Algorithm and benchmark dataset for stain separation in histology images,
ICIP14(3953-3957)
IEEE DOI 1502
Accuracy BibRef

Adametz, D.[David], Rey, M.[Mélanie], Roth, V.[Volker],
Information Bottleneck for Pathway-Centric Gene Expression Analysis,
GCPR14(81-91).
Springer DOI 1411
BibRef

Rogowski, M., Cannistraci, C.V., Alanis-Lobato, G., Weber, P.P., Ravasi, T., Schulze, J.P., Acevedo-Feliz, D.,
Observing change in crowded data sets in 3D space: Visualizing gene expression in human tissues,
3DUI13(173-174)
IEEE DOI 1406
biology computing BibRef

Cervantes, J.[Jair], Huang, D.S.[De-Shuang], Li, X.O.[Xiao-Ou], Yu, W.[Wen],
A New Approach to Detect Splice-Sites Based on Support Vector Machines and a Genetic Algorithm,
CIARP13(II:342-349).
Springer DOI 1311
BibRef

Ding, H.[Hu], Stojkovic, B.[Branislav], Berezney, R.[Ronald], Xu, J.H.[Jin-Hui],
Gauging Association Patterns of Chromosome Territories via Chromatic Median,
CVPR13(1296-1303)
IEEE DOI 1309
BibRef

Wolf, T.[Thomas], Shelest, V.[Vladimir], Shelest, E.[Ekaterina],
Motif-Based Method for the Genome-Wide Prediction of Eukaryotic Gene Clusters,
PR-PS-BB13(389-398).
Springer DOI 1309
BibRef

Amornbunchornvej, C., Limpiti, T., Assawamakin, A., Intarapanich, A., Tongsima, S.,
Iterative Neighbor-Joining tree clustering algorithm for genotypic data,
ICPR12(1827-1830).
WWW Link. 1302
BibRef

Uddin, B.[Bakhtiyar], Celebi, M.E.[M. Emre], Kingravi, H.[Hassan], Schaefer, G.[Gerald],
Accurate genomic signal recovery using compressed sensing,
ICPR12(3144-3147).
WWW Link. 1302
BibRef

Chen, K.C.J.[Kuan-Chieh Jackie], Yu, Y.[Yiyi], Li, R.Q.[Rui-Qin], Lee, H.C.[Hao-Chih], Yang, G.[Ge], Kovacevic, J.[Jelena],
Adaptive active-mask image segmentation for quantitative characterization of mitochondrial morphology,
ICIP12(2033-2036).
IEEE DOI 1302
BibRef

Loganathan, E., Anuja, M.R., Madian, N.[Nirmala],
Automated identification of centromere position and centromere index(CI) of human chromosome images,
IMVIP12(13-16).
IEEE DOI 1302
BibRef

Puniyani, K.[Kriti], Xing, E.P.[Eric P.],
Inferring Gene Interaction Networks from ISH Images via Kernelized Graphical Models,
ECCV12(VI: 72-85).
Springer DOI 1210
BibRef

Oncina, J.[Jose], Vidal, E.[Enrique],
Interactive Structured Output Prediction: Application to Chromosome Classification,
IbPRIA11(256-264).
Springer DOI 1106
BibRef

Oskouei, B.C.[Baharak Choudari], Shanbehzadeh, J.[Jamshid],
Chromosome Classification Based on Wavelet Neural Network,
DICTA10(605-610).
IEEE DOI 1012
BibRef

Sallaberry, A.[Arnaud], Pecheur, N.[Nicolas], Bringay, S.[Sandra], Roche, M.[Mathieu], Teisseire, M.[Maguelonne],
Discovering Novelty in Gene Data: From Sequential Patterns to Visualization,
ISVC10(III: 534-543).
Springer DOI 1011
BibRef

Jianu, R.[Radu], Laidlaw, D.H.[David H.],
Visualizing Gene Co-expression as Google Maps,
ISVC10(III: 494-503).
Springer DOI 1011
BibRef

Arachchige, A.S.[Akila Subasinghe], Samarabandu, J.[Jagath], Knoll, J.[Joan], Khan, W.[Wahab], Rogan, P.[Peter],
An image processing algorithm for accurate extraction of the centerline from human metaphase chromosomes,
ICIP10(3613-3616).
IEEE DOI 1009
BibRef

Verma, N.K., Gupta, P., Agrawal, P., Cui, Y.[Yan],
Fuzzy rule based unsupervised approach for salient gene extraction,
AIPR09(1-5).
IEEE DOI 0910
See also Prediction of satellite images using fuzzy rule based Gaussian regression. BibRef

Piroonratana, T.[Theera], Wongseree, W.[Waranyu], Usavanarong, T.[Touchpong], Assawamakin, A.[Anunchai], Limwongse, C.[Chanin], Chaiyaratana, N.[Nachol],
Identification of Ancestry Informative Markers from Chromosome-Wide Single Nucleotide Polymorphisms Using Symmetrical Uncertainty Ranking,
ICPR10(2448-2451).
IEEE DOI 1008
BibRef

Yu, X.[Xiao], Meng, F.J.[Fan-Jiang], Zhang, X.H.[Xi-Hai], Lu, L.[Lina],
Mining osmotic stress response genes from Arabidopsis genome,
IASP10(470-472).
IEEE DOI 1004
BibRef

Akila Subasinghe, A., Samarabandu, J.[Jagath], Knoll, J.[Joan], Khan, W.[Wahab], Rogan, P.[Peter],
An Accurate Image Processing Algorithm for Detecting FISH Probe Locations Relative to Chromosome Landmarks on DAPI Stained Metaphase Chromosome Images,
CRV10(223-230).
IEEE DOI 1005
Fluorescence In Situ Hybridization. Genetic sequences. BibRef

Ram, S.[Sundaresh], Rodriguez, J.J.[Jeffrey J.], Bosco, G.[Giovanni],
Segmentation and classification of 3-D spots in FISH images,
Southwest10(101-104).
IEEE DOI 1005
Fluorescence in-situ hybridization. BibRef

Abe, T.[Toru], Hamada, C.[Chieko], Kinoshita, T.[Tetsuo],
A Chromosome Image Recognition Method Based on Subregions,
ACCV09(III: 611-620).
Springer DOI 0909
BibRef
And:
Chromosome image recognition with subregion search iteration,
ICIP09(4169-4172).
IEEE DOI 0911
BibRef
And:
Chromosome Image Recognition with Local Band Patterns,
MVA09(308-).
PDF File. 0905
BibRef

Kim, H.S.[Hung-Sik], Chang, H.W.[Hau-Wen], Liu, H.B.[Hai-Bin], Lee, J.K.[Jeong-Kyu], Lee, D.W.[Dong-Won],
BIM: Image matching using biological gene sequence alignment,
ICIP09(205-208).
IEEE DOI 0911
Apply the BLAST matching. BibRef

Martins, D.C.[David Correa], de Oliveira, E.A.[Evaldo Araújo], Louzada, V.H.[Vitor Hugo], Hashimoto, R.F.[Ronaldo Fumio],
Inference of Restricted Stochastic Boolean GRN's by Bayesian Error and Entropy Based Criteria,
CIARP10(144-152).
Springer DOI 1011
GRN: gene regulatory network. BibRef

Lopes, F.M.[Fabrício M.], de Oliveira, E.A.[Evaldo A.], Cesar, R.M.[Roberto M.],
Analysis of the GRNs Inference by Using Tsallis Entropy and a Feature Selection Approach,
CIARP09(473-480).
Springer DOI 0911
GRN: gene regulatory network. Relationship among genes. BibRef

Kaissi, M.E.[Muhieddine El], Jia, M.[Ming], Reiners, D.[Dirk], Dickerson, J.[Julie], Wuertele, E.[Eve],
Reaction Centric Layout for Metabolic Networks,
ISVC09(II: 81-91).
Springer DOI 0911
BibRef

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See also Automatic Localization of the Optic Disc in Retinal Images Based on the Entropy of Vascular Directions. BibRef

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Earlier:
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Chapter on Medical Applications, CAT, MRI, Ultrasound, Heart Models, Brain Models continues in
Cell Nucleus, Cell Nuclei Analysis, Detection .


Last update:Sep 22, 2017 at 21:00:01