21.9.7.4 Brain, Cortex, Registration, Alignment, MRI, Other

Chapter Contents (Back)
Brain. Cortex. Alignment. Registration. MRI.

Zuk, T.D., Atkins, M.S.,
A comparison of manual and automatic methods for registering scans of the head,
MedImg(15), No. 5, October 1996, pp. 732-744.
IEEE Top Reference. 0203
Evaluation, Registration. BibRef

Verard, L., Allain, P., Travere, J.M., Baron, J.C., Bloyet, D.,
Fully automatic identification of AC and PC landmarks on brain MRI using scene analysis,
MedImg(16), No. 5, October 1997, pp. 610-616.
IEEE Top Reference. 0205
BibRef

Davatzikos, C.,
Spatial Transformation and Registration of Brain Images Using Elastically Deformable Models,
CVIU(66), No. 2, May 1997, pp. 207-222.
DOI Link 9705
BibRef
Earlier:
Non-Linear Registration of Brain Images Using Deformable Models,
MMBIA96(REGISTRATION II) BibRef

Chen, M.[Mei], Kanade, T.[Takeo], Pomerleau, D.A.[Dean A.], Rowley, H.A.[Henry A.],
Anomaly Detection through Registration,
PR(32), No. 1, January 1999, pp. 113-128.
Elsevier DOI BibRef 9901
Earlier: A1, A2, A4, A3: CVPR98(304-310).
IEEE DOI Find anomalies in medical images by registration with an atlas image. BibRef

Chen, M.[Mei], Kanade, T.[Takeo], Pomerleau, D.A.[Dean A.],
Bootstrap a Statistical Brain Atlas,
WACV00(114-119).
IEEE DOI 0010
Registration of the atlas description of a feature to a given person (where there are individual changes or anomolies). BibRef

Gee, J.C.,
On matching brain volumes,
PR(32), No. 1, January 1999, pp. 99-111.
Elsevier DOI BibRef 9901

Sandor, S., Leahy, R.,
Surface-based labeling of cortical anatomy using a deformable atlas,
MedImg(16), No. 1, February 1997, pp. 41-54.
IEEE Top Reference. 0205
BibRef
Earlier:
Matching deformable atlas models to preprocessed magnetic resonance brain images,
ICIP94(III: 686-690).
IEEE DOI 9411
BibRef

Freeborough, P.A., Fox, N.C.,
The boundary shift integral: an accurate and robust measure of cerebral volume changes from registered repeat MRI,
MedImg(16), No. 5, October 1997, pp. 623-629.
IEEE Top Reference. 0205
BibRef

Holden, M., Hill, D.L.G., Denton, E.R.E., Jarosz, J.M., Cox, T.C.S., Rohlfing, T., Goodey, J., Hawkes, D.J.,
Voxel similarity measures for 3-D serial MR brain image registration,
MedImg(19), No. 2, February 2000, pp. 94-102.
IEEE Top Reference. 0110
BibRef

Sanchez Castro, F.J., Pollo, C., Meuli, R., Maeder, P., Cuisenaire, O., Bach Cuadra, M., Villemure, J.G., Thiran, J.P.,
A Cross Validation Study of Deep Brain Stimulation Targeting: From Experts to Atlas-Based, Segmentation-Based and Automatic Registration Algorithms,
MedImg(25), No. 11, November 2006, pp. 1440-1450.
IEEE DOI 0611
BibRef

Rohlfing, T.[Torsten], Maurer, Jr., C.R.[Calvin R.],
Shape-Based Averaging,
IP(16), No. 1, January 2007, pp. 153-161.
IEEE DOI 0701
Derived from
See also Shape-based interpolation of multidimensional objects. Produce regular structures for MRI data. BibRef

Holden, M., Schnabel, J.A., Hill, D.L.G.,
Quantification of small cerebral ventricular volume changes in treated growth hormone patients using nonrigid registration,
MedImg(21), No. 10, October 2002, pp. 1292-1301.
IEEE Top Reference. 0301
BibRef

Rueckert, D., Frangi, A.F., Schnabel, J.A.,
Automatic construction of 3-D statistical deformation models of the brain using nonrigid registration,
MedImg(22), No. 8, August 2003, pp. 1014-1025.
IEEE Abstract. 0308

See also Automatic construction of multiple-object three-dimensional statistical shape models: application to cardiac modeling. BibRef

Chen, H.M.[Hua-Mei], Varshney, P.K.,
Mutual Information-Based CT-MR Brain Image Registration Using Generalized Partial Volume Joint Histogram Estimation,
MedImg(22), No. 9, September 2003, pp. 1111-1119.
IEEE Abstract. 0309
BibRef

Nikou, C., Bueno, G., Heitz, F., Armspach, J.P.,
A Joint Physics-Based Statistical Deformable Model for Multimodal Brain Image Analysis,
MedImg(20), No. 10, October 2001, pp. 1026-1037.
IEEE Top Reference. 0111
BibRef
Earlier: A3, A1, A4, Only:
A Physically-Based Statistical Deformable Model for Brain Image Analysis,
ECCV00(II: 528-542).
Springer DOI 0003

See also Statistical Deformable Model-Based Segmentation of Image Motion. BibRef

Musse, O.[Olivier], Heitz, F.[Fabrice], Armspach, J.P.[Jean-Paul],
Topology Preserving Deformable Image Matching Using Constrained Hierarchical Parametric Models,
IP(10), No. 7, July 2001, pp. 1081-1093.
IEEE DOI 0108
BibRef
Earlier: ICIP00(Vol I: 505-508).
IEEE DOI 0008
BibRef

Musse, O.[Olivier], Heitz, F.[Fabrice], Armspach, J.P.[Jean-Paul],
Fast deformable matching of 3D images over multiscale nested subspaces. Application to atlas-based MRI segmentation,
PR(36), No. 8, August 2003, pp. 1881-1899.
Elsevier DOI 0304
BibRef

Bosc, M., Heitz, F., Armspach, J.P.,
Statistical atlas-based sub-voxel segmentation of 3d brain MRI,
ICIP03(II: 1077-1080).
IEEE DOI 0312
BibRef

Noblet, V.[Vincent], Heinrich, C.[Christian], Heitz, F.[Fabrice], Armspach, J.P.[Jean-Paul],
3-D Deformable Image Registration: A Topology Preservation Scheme Based on Hierarchical Deformation Models and Interval Analysis Optimization,
IP(14), No. 5, May 2005, pp. 553-566.
IEEE DOI 0505
BibRef
Earlier:
A Topology Preserving Non-rigid Registration Method Using a Symmetric Similarity Function-Application to 3-D Brain Images,
ECCV04(Vol III: 546-557).
Springer DOI 0405

See also Accurate Inversion of 3-D Transformation Fields. BibRef

Miri, S.[Sanae], Passat, N.[Nicolas], Armspach, J.P.[Jean-Paul],
Topology-Preserving Discrete Deformable Model: Application to Multi-segmentation of Brain MRI,
ICISP08(67-75).
Springer DOI 0807
BibRef

Ziyan, U.[Ulas], Sabuncu, M.R.[Mert R.], Grimson, W.E.L.[W. Eric L.], Westin, C.F.[Carl-Fredrik],
Consistency Clustering: A Robust Algorithm for Group-wise Registration, Segmentation and Automatic Atlas Construction in Diffusion MRI,
IJCV(85), No. 3, December 2009, pp. xx-yy.
Springer DOI 0911
BibRef
Earlier:
A Robust Algorithm for Fiber-Bundle Atlas Construction,
MMBIA07(1-8).
IEEE DOI 0710
BibRef

Gholipour, A.[Ali], Kehtarnavaz, N.[Nasser], Yousefi, S.[Siamak], Gopinath, K.S.[Kaundinya S.], Briggs, R.W.[Richard W.],
Symmetric deformable image registration via optimization of information theoretic measures,
IVC(28), No. 6, June 2010, pp. 965-975.
Elsevier DOI 1003
BibRef
Earlier: A3, A2, A4, A5, Only:
Two-stage registration of substrcutures in magnetic resonance brain images,
ICIP09(1729-1732).
IEEE DOI 0911
BibRef
Earlier: A1, A2, A5, A4, Only:
Kullback-Leibler Distance Optimization for Non-rigid Registration of Echo-Planar to Structural Magnetic Resonance Brain Images,
ICIP07(VI: 221-224).
IEEE DOI 0709
Information theoretic measures; Deformable image registration; Mutual information
See also Robust Super-Resolution Volume Reconstruction From Slice Acquisitions: Application to Fetal Brain MRI. BibRef

Gholipour, A., Kehtarnavaz, N., Gopinath, K.S., Briggs, R.W., Devous, M., Haley, R.,
Distortion Correction via Non-rigid Registration of Functional to Anatomical Magnetic Resonance Brain Images,
ICIP06(1181-1184).
IEEE DOI 0610
BibRef

Yeo, B.T.T., Sabuncu, M.R., Vercauteren, T., Holt, D.J., Amunts, K., Zilles, K., Golland, P.[Polina], Fischl, B.[Bruce],
Learning Task-Optimal Registration Cost Functions for Localizing Cytoarchitecture and Function in the Cerebral Cortex,
MedImg(29), No. 7, July 2010, pp. 1424-1441.
IEEE DOI 1007
BibRef

So, R.W.K.[Ronald W.K.], Tang, T.W.H.[Tommy W.H.], Chung, A.C.S.[Albert C.S.],
Non-rigid image registration of brain magnetic resonance images using graph-cuts,
PR(44), No. 10-11, October-November 2011, pp. 2450-2467.
Elsevier DOI 1101
BibRef
Earlier: A1, A3, Only:
Non-rigid image registration by using graph-cuts with mutual information,
ICIP10(4429-4432).
IEEE DOI 1009
Non-rigid image registration; Graph-cuts BibRef

So, R.W.K.[Ronald W.K.], Chung, A.C.S.[Albert C.S.],
A novel learning-based dissimilarity metric for rigid and non-rigid medical image registration by using Bhattacharyya Distances,
PR(62), No. 1, 2017, pp. 161-174.
Elsevier DOI 1705
BibRef
Earlier:
Learning-based non-rigid image registration using prior joint intensity distributions with graph-cuts,
ICIP11(709-712).
IEEE DOI 1201
Bhattacharyya Distance BibRef

Liao, S.[Shu], Law, M.W.K.[Max W.K.], Chung, A.C.S.[Albert C.S.],
Non-rigid image registration using electric current flow,
MMBIA12(169-174).
IEEE DOI 1203
BibRef

Faisan, S., Passat, N., Noblet, V., Chabrier, R., Meyer, C.,
Topology Preserving Warping of 3-D Binary Images According to Continuous One-to-One Mappings,
IP(20), No. 8, August 2011, pp. 2135-2145.
IEEE DOI 1108
BibRef

Faisan, S.[Sylvain],
A new paradigm to compare a subject to a statistical model. Application to the detection of skull abnormalities,
PRL(33), No. 10, 15 July 2012, pp. 1309-1315.
Elsevier DOI 1205
Subject vs group comparison; Multivariate Gaussian Markov random field; Skull abnormality detection BibRef

Pennec, X., Cachier, P., Ayache, N.J.,
Tracking brain deformations in time sequences of 3D US images,
PRL(24), No. 4-5, February 2003, pp. 801-813.
Elsevier DOI 0211
BibRef

Miga, M.I., Sinha, T.K., Cash, D.M., Galloway, R.L., Weil, R.J.,
Cortical surface registration for image-guided neurosurgery using laser-range scanning,
MedImg(22), No. 8, August 2003, pp. 973-985.
IEEE Abstract. 0308
BibRef

Miga, M.I., Paulsen, K.D., Lemery, J.M., Eisner, S.D., Hartov, A., Kennedy, F.E., Roberts, D.W.,
Model-updated image guidance: initial clinical experiences with gravity-induced brain deformation,
MedImg(18), No. 10, October 1999, pp. 866-874.
IEEE Top Reference. 0110
BibRef

Lunn, K.E.[Karen E.], Paulsen, K.D.[Keith D.], Roberts, D.W.[David W.], Kennedy, F.E.[Francis E.], Hartov, A.[Alex], Platenik, L.A.[Leah A.],
Nonrigid brain registration: synthesizing full volume deformation fields from model basis solutions constrained by partial volume intraoperative data,
CVIU(89), No. 2-3, February-March 2003, pp. 299-317.
Elsevier DOI 0304
BibRef

Hellier, P., Barillot, C., Corouge, I., Gibaud, B., Le Goualher, G., Collins, D.L., Evans, A., Malandain, G., Ayache, N.J., Christensen, G.E., Johnson, H.J.,
Retrospective evaluation of intersubject brain registration,
MedImg(22), No. 9, September 2003, pp. 1120-1130.
IEEE Abstract. 0309
BibRef

Hipwell, J.H., Penney, G.P., McLaughlin, R.A., Rhode, K., Summers, P., Cox, T.C.S., Byrne, J.V., Noble, J.A., Hawkes, D.J.,
Intensity-based 2-D-3-D registration of cerebral angiograms,
MedImg(22), No. 11, November 2003, pp. 1417-1426.
IEEE Abstract. 0311

See also New Validation Method for X-ray Mammogram Registration Algorithms Using a Projection Model of Breast X-ray Compression, A.
See also Comparison of a Similarity-Based and a Feature-Based 2-D to 3-D Registration Method for Neurointerventional Use, A. BibRef

Gefen, S., Tretiak, O.J., Nissanov, J.,
Elastic 3-D alignment of rat brain histological images,
MedImg(22), No. 11, November 2003, pp. 1480-1489.
IEEE Abstract. 0311
BibRef

Tuzikov, A.V.[Alexander V.], Colliot, O.[Olivier], Bloch, I.[Isabelle],
Evaluation of the symmetry plane in 3D MR brain images,
PRL(24), No. 14, October 2003, pp. 2219-2233.
Elsevier DOI 0307
BibRef
Earlier:
Brain symmetry plane computation in MR images using inertia axes and optimization,
ICPR02(I: 516-519).
IEEE DOI 0211
BibRef

Bloch, I.[Isabelle], Colliot, O.[Olivier], Camara, O.[Oscar], Géraud, T.[Thierry],
Fusion of spatial relationships for guiding recognition, example of brain structure recognition in 3D MRI,
PRL(26), No. 4, March 2005, pp. 449-457.
Elsevier DOI 0501
BibRef

Cointepas, Y., Bloch, I., Garnero, L.,
Cellular complexes: A tool for 3d homotopic segmentation in brain images,
ICIP98(III: 832-836).
IEEE DOI 9810
BibRef

Xue, Z.[Zhong], Shen, D.G.[Ding-Gang], Davatzikos, C.[Christos],
Determining Correspondence in 3-D MR Brain Images Using Attribute Vectors as Morphological Signatures of Voxels,
MedImg(23), No. 10, October 2004, pp. 1276-1291.
IEEE Abstract. 0410
BibRef
Earlier:
Statistically-Constrained High-Dimensional Warping Using Wavelet-Based Priors,
MMBIA06(71).
IEEE DOI 0609

See also HAMMER: Hierarchical Attribute Matching Mechanism for Elastic Registration. BibRef

Shen, D.G.[Ding-Gang],
Fast image registration by hierarchical soft correspondence detection,
PR(42), No. 5, May 2009, pp. 954-961.
Elsevier DOI 0902
Deformable registration; Non-rigid registration; Feature matching; Local descriptor BibRef

Lord, N.A.[Nicholas A.], Ho, J.[Jeffrey], Vemuri, B.C.[Baba C.], Eisenschenk, S.J.[Stephan J.],
Simultaneous Registration and Parcellation of Bilateral Hippocampal Surface Pairs for Local Asymmetry Quantification,
MedImg(26), No. 4, April 2007, pp. 471-478.
IEEE DOI 0704
BibRef
And:
A Geometric Variational Framework for Simultaneous Registration and Parcellation of Homologous Surfaces,
SSVM07(789-800).
Springer DOI 0705
BibRef

Lord, N.A.[Nicholas A.], Ho, J.[Jeffrey], Vemuri, B.C.[Baba C.],
USSR: A Unified Framework for Simultaneous Smoothing, Segmentation, and Registration of Multiple Images,
ICCV07(1-6).
IEEE DOI 0710
BibRef

Wang, F.[Fei], Vemuri, B.C.[Baba C.], Rangarajan, A.[Anand], Eisenschenk, S.J.[Stephan J.],
Simultaneous Nonrigid Registration of Multiple Point Sets and Atlas Construction,
PAMI(30), No. 11, November 2008, pp. 2011-2022.
IEEE DOI 0809
Matching, Surfaces. Registering 3D data for parts of the brain. BibRef

Makrogiannis, S.[Sokratis], Verma, R.[Ragini], Davatzikos, C.[Christos],
Anatomical Equivalence Class: A Morphological Analysis Framework Using a Lossless Shape Descriptor,
MedImg(26), No. 4, April 2007, pp. 619-631.
IEEE DOI 0704
BibRef

Lian, N.X.[Nai-Xiang], Davatzikos, C.[Christos],
Groupwise morphometric analysis based on morphological appearance manifold,
MMBIA09(133-140).
IEEE DOI 0906
BibRef

Makrogiannis, S.[Sokratis], Verma, R.[Ragini], Karacali, B.[Bilge], Davatzikos, C.[Christos],
A Joint Transformation and Residual Image Descriptor for Morphometric Image Analysis using an Equivalence Class Formulation,
MMBIA06(74).
IEEE DOI 0609
BibRef

Bach Cuadra, M., Pollo, C., Bardera, A., Cuisenaire, O., Villemure, J.G., Thiran, J.P.,
Atlas-Based Segmentation of Pathological MR Brain Images Using a Model of Lesion Growth,
MedImg(23), No. 10, October 2004, pp. 1301-1314.
IEEE Abstract. 0410
BibRef
Earlier:
Atlas-Based Segmentation of Pathological Brain MR Images,
ICIP03(I: 573-576).
IEEE DOI 0312

See also Harmonic Active Contours. BibRef

Clatz, O., Sermesant, M., Bondiau, P.Y., Delingette, H., Warfield, S.K., Malandain, G., Ayache, N.J.,
Realistic Simulation of the 3-D Growth of Brain Tumors in MR Images Coupling Diffusion With Biomechanical Deformation,
MedImg(24), No. 10, October 2005, pp. 1334-1346.
IEEE DOI 0510
BibRef

Clatz, O., Delingette, H., Talos, I.F., Golby, A.J., Kikinis, R., Jolesz, F.A., Ayache, N.J., Warfield, S.K.,
Robust nonrigid registration to capture brain shift from intraoperative MRI,
MedImg(24), No. 11, November 2005, pp. 1417-1427.
IEEE DOI 0512
BibRef

Yeo, B.T.T., Vercauteren, T., Fillard, P., Peyrat, J.M., Pennec, X., Golland, P., Ayache, N.J., Clatz, O.,
DT-REFinD: Diffusion Tensor Registration With Exact Finite-Strain Differential,
MedImg(28), No. 12, December 2009, pp. 1914-1928.
IEEE DOI 0912
BibRef

Peyrat, J.M., Delingette, H., Sermesant, M., Xu, C.Y.[Chen-Yang], Ayache, N.J.,
Registration of 4D Cardiac CT Sequences Under Trajectory Constraints With Multichannel Diffeomorphic Demons,
MedImg(29), No. 7, July 2010, pp. 1351-1368.
IEEE DOI 1007
BibRef

de Craene, M., du Bois d'Aische, A., Macq, B., Warfield, S.K.,
Multi-Subject Variational Registration for Probabilistic Unbiased Atlas Generation,
ICIP05(III: 601-604).
IEEE DOI 0512
BibRef

Wu, G.R.[Guo-Rong], Qi, F.H.[Fei-Hu], Shen, D.G.[Ding-Gang],
Learning-based deformable registration of MR brain images,
MedImg(25), No. 9, September 2006, pp. 1145-1157.
IEEE DOI 0609
BibRef

Luan, H.X.[Hong-Xia], Qi, F.H.[Fei-Hu], Xue, Z.[Zhong], Chen, L.[Liya], Shen, D.G.[Ding-Gang],
Multimodality image registration by maximization of quantitative-qualitative measure of mutual information,
PR(41), No. 1, January 2008, pp. 285-298.
Elsevier DOI 0710
Multimodality image registration; Mutual information; Quantitative-qualitative measure of mutual information; Salient measure; Utilities of events BibRef

Luan, H.X.[Hong-Xia], Qi, F.H.[Fei-Hu], Shen, D.G.[Ding-Gang],
Multi-modal Image Registration by Quantitative-Qualitative Measure of Mutual Information (Q-MI),
CVBIA05(378-387).
Springer DOI 0601
BibRef

Henn, S.[Stefan],
A Full Curvature Based Algorithm for Image Registration,
JMIV(24), No. 2, March 2006, pp. 195-208.
Springer DOI 0605
BibRef

Henn, S.[Stefan], Witsch, K.[Kristian],
A Variational Image Registration Approach Based on Curvature Scale Space,
ScaleSpace05(143-154).
Springer DOI 0505
BibRef

Henn, S.[Stefan], Hömke, L.[Lars], Witsch, K.[Kristian],
Lesion Preserving Image Registration with Applications to Human Brains,
DAGM04(496-503).
Springer DOI 0505
BibRef

Wang, J.Z.[Jian-Zhe], Jiang, T.Z.[Tian-Zi],
Nonrigid registration of brain MRI using NURBS,
PRL(28), No. 2, 15 January 2007, pp. 214-223.
Elsevier DOI 0611
Nonrigid registration; Free-Form Deformations; NURBS BibRef

Schwarz, D.[Daniel], Kasparek, T.[Tomas], Provaznik, I.[Ivo], Jarkovsky, J.[Jiri],
A Deformable Registration Method for Automated Morphometry of MRI Brain Images in Neuropsychiatric Research,
MedImg(26), No. 4, April 2007, pp. 452-461.
IEEE DOI 0704
BibRef

Schwarz, D.[Daniel], Kasparek, T.[Tomas],
Brain Tissue Classification with Automated Generation of Training Data Improved by Deformable Registration,
CAIP07(301-308).
Springer DOI 0708
BibRef

Joshi, A.A., Shattuck, D.W., Thompson, P.M., Leahy, R.M.,
Surface-Constrained Volumetric Brain Registration Using Harmonic Mappings,
MedImg(26), No. 12, December 2007, pp. 1657-1669.
IEEE DOI 0712
BibRef

Joshi, A.A., Shattuck, D.W., Thompson, P.M., Leahy, R.M.,
A Parameterization-Based Numerical Method for Isotropic and Anisotropic Diffusion Smoothing on Non-Flat Surfaces,
IP(18), No. 6, June 2009, pp. 1358-1365.
IEEE DOI 0905
BibRef

Joshi, A.A.[Anand A.], Shattuck, D.W.[David W.], Leahy, R.M.[Richard M.],
A Method for Automated Cortical Surface Registration and Labeling,
WBIR12(180-189).
Springer DOI 1208
BibRef

Li, Y.[Yong], Xu, N.[Ning], Fitzpatrick, J.M., Morgan, V.L., Pickens, D.R., Dawant, B.M.,
Accounting for Signal Loss Due to Dephasing in the Correction of Distortions in Gradient-Echo EPI Via Nonrigid Registration,
MedImg(26), No. 12, December 2007, pp. 1698-1707.
IEEE DOI 0712
BibRef

Chung, M.K.[Moo K.], Dalton, K.M.[Kim M.], Shen, L.[Li], Evans, A.C.[Alan C.], Davidson, R.J.[Richard J.],
Weighted Fourier Series Representation and Its Application to Quantifying the Amount of Gray Matter,
MedImg(26), No. 4, April 2007, pp. 566-581.
IEEE DOI 0704
BibRef

Chung, M.K.[Moo K.], Dalton, K.M.[Kim M.], Davidson, R.J.[Richard J.],
Tensor-Based Cortical Surface Morphometry via Weighted Spherical Harmonic Representation,
MedImg(27), No. 8, August 2008, pp. 1143-1151.
IEEE DOI 0808
BibRef

Kim, S.G.[Seung-Goo], Chung, M.K.[Moo K.], Schaefer, S.M.[Stacey M.], van Reekum, C.[Carien], Davidson, R.J.[Richard J.],
Sparse shape representation using the Laplace-Beltrami eigenfunctions and its application to modeling subcortical structures,
MMBIA12(25-32).
IEEE DOI 1203
BibRef

Kim, S.G.[Seung-Goo], Chung, M.K.[Moo K.], Seo, S.[Seongho], Schaefer, S.M.[Stacey M.], van Reekum, C.M.[Carien M.], Davidson, R.J.[Richard J.],
Heat Kernel Smoothing via Laplace-Beltrami Eigenfunctions and Its Application to Subcortical Structure Modeling,
PSIVT11(I: 36-47).
Springer DOI 1111
BibRef

Liu, J., Gao, W., Huang, S., Nowinski, W.L.,
A Model-Based, Semi-Global Segmentation Approach for Automatic 3-D Point Landmark Localization in Neuroimages,
MedImg(27), No. 8, August 2008, pp. 1034-1044.
IEEE DOI 0808
BibRef

Singh, M.[Manbir], Rajagopalan, A.[Amrita], Kim, T.S.[Tae-Seong], Hwang, D.[Darryl], Chui, H.[Helena], Zhang, X.L.[Xiao-Ling], Lee, A.Y.[Ae-Young], Zarow, C.[Chris],
Co-registration of in vivo human MRI brain images to postmortem histological microscopic images,
IJIST(18), No. 5-6, 2008, pp. 325-335.
DOI Link 0804
BibRef

Lin, W., Song, H.K.,
Extrapolation and Correlation (EXTRACT): A New Method for Motion Compensation in MRI,
MedImg(28), No. 1, January 2009, pp. 82-93.
IEEE DOI 0901
BibRef

Li, J., Shi, Y.G., Tran, G., Dinov, I.D., Wang, D.J.J., Toga, A.W.,
Fast Local Trust Region Technique for Diffusion Tensor Registration Using Exact Reorientation and Regularization,
MedImg(33), No. 5, May 2014, pp. 1005-1022.
IEEE DOI 1405
Approximation methods BibRef

Shi, Y., Lai, R., Wang, D.J.J., Pelletier, D., Mohr, D., Sicotte, N., Toga, A.W.,
Metric Optimization for Surface Analysis in the Laplace-Beltrami Embedding Space,
MedImg(33), No. 7, July 2014, pp. 1447-1463.
IEEE DOI 1407
Biomedical imaging BibRef

Joshi, S.H.[Shantanu H.], Cabeen, R.P.[Ryan P.], Joshi, A.A.[Anand A.], Sun, B.[Bo], Dinov, I.D., Narr, K.L.[Katherine L.], Toga, A.W.[Arthur W.], Woods, R.P.[Roger P.],
Diffeomorphic Sulcal Shape Analysis on the Cortex,
MedImg(31), No. 6, June 2012, pp. 1195-1212.
IEEE DOI 1206
BibRef
Earlier: A1, A2, A3, A8, A6, A7, Only:
Diffeomorphic sulcal shape analysis for cortical surface registration,
CVPR10(475-482).
IEEE DOI 1006
BibRef

Artaechevarria, X., Munoz-Barrutia, A., Ortiz-de-Solórzano, C.[Carlos],
Combination Strategies in Multi-Atlas Image Segmentation: Application to Brain MR Data,
MedImg(28), No. 8, August 2009, pp. 1266-1277.
IEEE DOI 0909
BibRef

Kim, K., Habas, P.A., Rousseau, F., Glenn, O.A., Barkovich, A.J., Studholme, C.,
Intersection Based Motion Correction of Multislice MRI for 3-D in Utero Fetal Brain Image Formation,
MedImg(29), No. 1, January 2010, pp. 146-158.
IEEE DOI 1001
BibRef

Kim, K., Habas, P.A., Rajagopalan, V., Scott, J.A., Corbett-Detig, J.M., Rousseau, F., Barkovich, A.J., Glenn, O.A., Studholme, C.,
Bias Field Inconsistency Correction of Motion-Scattered Multislice MRI for Improved 3D Image Reconstruction,
MedImg(30), No. 9, September 2011, pp. 1704-1712.
IEEE DOI 1109
BibRef

Liao, S., Chung, A.C.S.,
Feature Based Nonrigid Brain MR Image Registration With Symmetric Alpha Stable Filters,
MedImg(29), No. 1, January 2010, pp. 106-119.
IEEE DOI 1001
BibRef

Liao, S., Chung, A.C.S.,
Nonrigid Brain MR Image Registration Using Uniform Spherical Region Descriptor,
IP(21), No. 1, January 2012, pp. 157-169.
IEEE DOI 1112
BibRef

Lin, X.B.[Xiang-Bo], Qiu, T.S.[Tian-Shuang], Morain-Nicolier, F.[Frederic], Ruan, S.[Su],
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brain, guided image filter, image fusion, image statistics BibRef

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Shape, Image reconstruction, Magnetic resonance imaging, Corpus callosum, Image resolution, Geometry, tract modeling BibRef

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Conductivity, Magnetic resonance imaging, Brain modeling, Head, Magnetic heads, Image segmentation, Conductors, Precision medicine, TMS BibRef

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SSIAI20(14-17)
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biomedical MRI, brain, data visualisation, medical image processing, neurophysiology, stochastic processes, visualization BibRef

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fuzzy clustering, image segmentation, kernel methods, medical imaging BibRef

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CT, image fusion, medical diagnosis, MGFPA, MRI, multilabel optimization problem, parameter BibRef

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channel attention, folding penalization, image registration, multi-scale attention, unsupervised BibRef

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Medical diagnostic imaging, Image fusion, Feature extraction, Image color analysis, Medical services, Image processing, medical semantic information BibRef

Wang, H.Q.[Hai-Qiao], Ni, D.[Dong], Wang, Y.[Yi],
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Deformation, Decoding, Feature extraction, Deformable models, Training, Image resolution, Image registration, brain MRI BibRef

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Ultrasonic imaging, Training, Image segmentation, Measurement, Biopsy, Multitasking, Deep learning, Convolutional neural network, US-MR registration BibRef


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IR-FRestormer: Iterative Refinement with Fourier-Based Restormer for Accelerated MRI Reconstruction,
WACV24(7640-7649)
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Deep learning, Runtime, Magnetic resonance imaging, Memory management, Transformers, Brain modeling, Image restoration, Biomedical / healthcare / medicine BibRef

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Geodesic Regression Characterizes 3D Shape Changes in the Female Brain During Menstruation,
CVAMD23(2534-2543)
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ICIP23(2805-2809)
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Exploring Intensity Invariance in Deep Neural Networks for Brain Image Registration,
DICTA20(1-7)
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Training, Image registration, Protocols, Computational modeling, X-rays, Brain modeling, Biological neural networks, intensity invariance BibRef

Yang, X., Zhao, X., Tjio, G., Chen, C., Wang, L., Wen, B., Su, Y.,
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Image segmentation, Benchmark testing, Machine learning, Corpus callosum, Magnetic resonance imaging, Training, Manuals, Fully Convolutional Networks. BibRef

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Training, Generative adversarial networks, Spatial resolution, Magnetic resonance imaging BibRef

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Two-Stage Unsupervised Learning Method for Affine and Deformable Medical Image Registration,
ICIP19(1332-1336)
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Medical image registration, Convolutional neural network, Unsupervised learning, Brain MRI BibRef

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Application of Photogrammetry to Brain Anatomy,
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Kornaropoulos, E.N., Zacharaki, E.I., Zerbib, P., Lin, C., Rahmouni, A., Paragios, N.,
Optimal Estimation of Diffusion in DW-MRI by High-Order MRF-Based Joint Deformable Registration and Diffusion Modeling,
WBIR16(618-625)
IEEE DOI 1612
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Alegro, M., Amaro, E., Loring, B., Heinsen, H., Alho, E., Zöllei, L., Ushizima, D., Grinberg, L.T.,
Multimodal Whole Brain Registration: MRI and High Resolution Histology,
WBIR16(634-642)
IEEE DOI 1612
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Shao, W., Christensen, G.E., Johnson, H.J., Song, J.H., Durumeric, O.C., Johnson, C.P., Shaffer, J.J., Magnotta, V.A., Fiedorowicz, J.G., Wemmie, J.A.,
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WBIR16(549-557)
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diffeomorphic image registration;shape collapse BibRef

Kim, M.J.[Min-Jeong], Wu, G.R.[Guo-Rong], Rekik, I.[Isrem], Shen, D.G.[Ding-Gang],
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Springer DOI 1611
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Baâzaoui, A.[Abir], Berrabah, M.[Mouna], Barhoumi, W.[Walid], Zagrouba, E.[Ezzeddine],
Multimodal Registration of PET/MR Brain Images Based on Adaptive Mutual Information,
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Springer DOI 1611
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Kornaropoulos, E.N., Zacharaki, E.I., Zerbib, P., Lin, C., Rahmouni, A., Paragios, N.,
Deformable group-wise registration using a physiological model: Application to diffusion-weighted MRI,
ICIP16(2345-2349)
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Computational modeling BibRef

Sinno, Z., Bovik, A.C.,
Relating spatial and spectral models of oriented bandpass natural images,
Southwest16(89-92)
IEEE DOI 1605
Biological system modeling BibRef

Amin, M.F., Plis, S.M., Damaraju, E., Hjelm, D., Cho, K., Calhoun, V.D.,
Multimodal fusion of brain structural and functional imaging with a deep neural machine translation approach,
Southwest16(1-4)
IEEE DOI 1605
Brain modeling BibRef

Evain, T.[Timothée], Ripoche, X.[Xavier], Atif, J.[Jamal], Bloch, I.[Isabelle],
Fuzzy 'Along' Spatial Relation in 3D. Application to Anatomical Structures in Maxillofacial CBCT,
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Springer DOI 1511
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Li, Z.Y.[Zuo-Yong], An, L.[Le], Zhang, J.[Jun], Wang, L.[Li], Xia, J.J.[James J.], Shen, D.G.[Ding-Gang],
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Learning and Combining Image Similarities for Neonatal Brain Population Studies,
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Fast Brain MRI Registration with Automatic Landmark Detection Using a Single Template Image,
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Robust rigid registration of CT to MRI brain volumes using the SCV similarity measure,
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Earlier:
Quad-tree Based Entropy Estimator for Fast and Robust Brain Image Registration,
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See also Groupwise Registration of Multimodal Images by an Efficient Joint Entropy Minimization Scheme. BibRef

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WBIR06(136-143).
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Automatic Segmentation of Internal Structures of the Brain in MR Images Using a Tandem of Affine and Non Rigid Registration of an Anatomical Brain Atlas,
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Chapter on Medical Applications, CAT, MRI, Ultrasound, Heart Models, Brain Models continues in
Functional Magnetic Resonance, fMRI .


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